Coregonus clupeaformis (lake whitefish): 123492637
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Entry
123492637 CDS
T08357
Name
(RefSeq) chondroitin sulfate synthase 3-like
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cclu01100
Metabolic pathways
Module
cclu_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
123492637
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
123492637
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
123492637
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
123492637
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
O-Glycan
123492637
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
Glycos_transf_2
Anp1
Motif
Other DBs
NCBI-GeneID:
123492637
NCBI-ProteinID:
XP_045081305
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Position
15:12973108..12975674
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AA seq
524 aa
AA seq
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MQQLFYENYEHNKKGFIQELHSSKIHNAITLHPNKRPAYQYRLHGYMLSRDISRLRYRTI
LLHREGLAMSRLSDTEVQWEDQQLGAQPSYTRYQPAERGDVIEWDFLTGRHLYSTGENQM
PRQGLGSLLRTALEDTVLQVMEMINENSKARGRVIDFKEIKYGYRRVDPVHGAEYILDLL
LLYKKHKGRKVTVPVRRHAYLQQSFSRPFFSESEELDVVELVEAINTESQSFSFLSNSLK
IFSPFQFSESTREMHERSQRKVNILVPLTGRYDIFVRFMENFEKICLIPNQNVKLAIILV
DNDSNQDREKHLDLIKEYSKKYPKADLSVIPMTGDFSRGLALELGSSQLDNDTLLFFCDV
DLVFNGDALQRCRHNTIQGRQAYYPVVFSQYDPKVVYAGNTTPDDSSFVFTKKSGFWRDY
GFGITCIFKSDLQKAGGFDTSIQGWGLEDVDLFTKVINSGLKVFRSQEPGIVHIYHPVQC
DTSLEPKQYKMCLGSKASTYASSMQLAELWLEKHLGAGYNRTST
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagctcttctacgagaattacgagcacaacaagaagggtttcatccaggagctc
cacagcagcaagatccacaacgccatcacactgcatcccaacaagaggcctgcctaccag
taccggctacacggctacatgctgagccgcgacatctcccggctacgctaccgcaccatc
ctcctgcaccgcgagggcctggccatgagtcggctcagcgatacagaggtgcagtgggag
gatcaacagctgggggcgcaaccttcctacacgcgctaccagcccgctgaaagaggggac
gtcatcgagtgggacttcctcactggccgacatctgtactcaacgggggaaaaccagatg
ccccggcagggcctcgggagcctgctccggactgccctggaagacacagtgcttcaggta
atggagatgatcaatgagaactccaaagcccgcgggcgtgttatcgacttcaaggagatc
aagtatggctaccgcagggttgaccccgtgcacggggctgagtacattctggacctactg
cttctgtacaagaaacacaaagggcgcaaagtgacagtacctgttaggaggcatgcgtac
ctgcagcagtctttcagtaggcccttcttcagtgagtctgaggaattggatgttgttgag
ctggtggaggccatcaacaccgagtcccagtccttctctttcctctccaactccctcaag
atcttctcgcctttccaattctctgagtcgaccagggagatgcacgaacgcagccagaga
aaggtcaacatcctggtcccgctgacaggccggtacgacatcttcgtccgcttcatggag
aactttgagaagatctgtctgatccccaaccagaacgtcaagctggccatcatattggtg
gacaacgacagcaaccaggacagggagaagcacttggacttgatcaaggagtacagcaag
aagtatcccaaagcggacctgtctgtcatccccatgacgggcgacttctcccgggggctg
gctctggagctgggctcgtcgcagcttgacaacgacacactgctcttcttctgtgacgtg
gacctggtcttcaacggggacgccctgcagcggtgtaggcacaacaccatccaagggagg
caggcttactatcccgtcgtctttagtcagtacgatccaaaagttgtctacgccggcaac
accacccctgacgacagcagttttgtgttcaccaagaaaagtggcttctggagggattac
ggctttggaatcacctgcatatttaaaagtgacttgcaaaaagctggcggtttcgatacg
tcgatccaaggctggggattggaagatgtagacctgttcactaaagtgattaactccggt
ttaaaagtgttccgcagccaggaaccaggaatcgtccacatttatcatcctgttcagtgc
gacactagccttgagcccaagcaatacaaaatgtgcctcgggtctaaggcaagtacttac
gcatcttcgatgcagttagccgagctgtggctggagaaacacttaggtgcagggtacaac
agaacttccacctga
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