Coregonus clupeaformis (lake whitefish): 123492662
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Entry
123492662 CDS
T08357
Name
(RefSeq) putative nuclease HARBI1 isoform X1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
123492662
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Gene silencing
Transposable elements
123492662
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GFIT
Motif
Pfam:
DDE_Tnp_4
DDE_Tnp_1
Plant_tran
HTH_Tnp_4
Motif
Other DBs
NCBI-GeneID:
123492662
NCBI-ProteinID:
XP_045081344
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Position
15:complement(53161088..53162765)
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AA seq
388 aa
AA seq
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MANRGGRRDVLQTLDDRELLRRYRLDRAGIMFVVDLLRDAITSPTRRHNAITPEKKVITT
LRYLATGKMQQCSSDDLGLSQSSVSRVITQTLTALSQPNIVTQFVSFPLDARTLHTHKRA
FMDIAGFPGVVGVIDGTHVRIIAPSEDEAVFVNRKNFHSINVQIVFNAAWKILDIVAKWP
GSTHDARMLSESGIRQLFERRYVPANCHLLGDSGYPCKPWLLTPYLQPRQGPQLNYNRAH
KTTRAVVERGIGQLKRRFHVLHGEVRLRPEKVSKLIIACAILHNICKVRQIAEPLEDGDE
DEDGDNDEDGGEEDIHIPQGNLAQSGLPYRANFTNLHFRQAVAPCHLRTCDGIKNYHSFT
AHHLQLLNARHRTQSLNGLFFRCSILRR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggccaacagaggaggcaggagagatgtcctgcaaacactggatgacagggaattattg
agacgctacagattggatcgtgcaggaatcatgtttgtggtggatctccttagagatgca
attacttcaccaactcgacgccacaacgctattacaccggagaagaaagtaatcacaacc
ctgaggtatttggcaacagggaaaatgcaacaatgcagcagtgatgacttgggtctgtcc
caatcctccgtcagcagagtcatcacccaaacactgacagctttgtcacaacctaatatt
gtgacacaatttgtttcattcccgctggatgcccgcactttacacacacataaaagggca
tttatggacattgcaggattccctggcgttgtgggtgtaattgatggaacacatgtgaga
ataattgcgccatcagaggacgaggctgtctttgttaacaggaagaatttccacagcatc
aatgtgcaaatagtgttcaatgcggcctggaagattttggacattgtggctaaatggcca
ggctccacacatgatgcgagaatgctctccgagagtggcatcagacagctttttgagaga
cgctatgtgccagctaattgccacttgttaggggacagtggctacccatgcaaaccatgg
ctccttacaccttacctccagccacgccaagggccccaactaaactataacagggcccac
aagacaacaagagcggtggtggagcgtggcataggccagcttaagaggcgctttcatgtt
ctccacggagaggtgcggctgaggcctgaaaaagtcagcaaactcatcatagcctgtgca
atattacacaatatttgcaaggttagacagattgcagaacctctggaggatggcgatgag
gatgaggatggagacaacgatgaggatggtggtgaagaagatattcacattccacagggg
aacctagcccagagtggactgccttacagggcaaacttcacaaatttacatttcaggcaa
gctgtagccccatgtcatttgagaacttgtgatggtattaagaactaccacagttttact
gcacatcacctgcaactgttaaatgcaagacacagaacacaatctctaaatggtttattt
tttaggtgttcaattttaaggcggtag
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