Coregonus clupeaformis (lake whitefish): 123492681
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Entry
123492681 CDS
T08357
Symbol
ndr1
Name
(RefSeq) nodal-related 1
KO
K04666
nodal
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
123492681 (ndr1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
123492681 (ndr1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
123492681 (ndr1)
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Transforming growth factors (RSTK binding)
123492681 (ndr1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
123492681
NCBI-ProteinID:
XP_045081395
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Position
15:complement(59667616..59669576)
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AA seq
405 aa
AA seq
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MEGLILAFFSALLVNLVCVVGAENIPGNREAFFHRISGGHRDHVHHSNRFPLYMMQLYRT
LLEGDTARAPPSVSAARTKSENNPRLHDSDSVLSLVAKSCHQSGGRWSVTFDMSSISASD
NVQRFELRIRLPTFSASERVTVDMYHSQSGRCSSPPCPESLFLGCLRAEPSSLTAMSNWR
VFNVTALLRYYWLHQGGSAPCHEEGRAEEREEGLERLLHPTADRVMMVVFSKHQTEKRAP
TLIRTAEHSKYVSLDRERAGAGPAVSVEGGKGARRRKRRGQYQRAGVAGVAPGVAPTEER
KGPLCRKVDMWVHFDQIGWSEWIVYPKRYNAYRCEGSCPTPVDETFSPTNHAYMQSLLKL
HHPDRVPCPSCVPTRLAPLSMLYYENGEVLMQHFEGMVVEECGCH
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggaaggactcatcttggctttcttctctgcgcttctggtgaacttggtttgtgtggtt
ggagcggagaatatccctgggaaccgtgaggctttcttccacagaattagtggaggtcac
agggaccatgttcatcactccaacaggttcccactctacatgatgcagctctaccggact
ctgctggagggggacaccgccagggcgccgccatctgtcagcgccgcccggaccaagagt
gagaacaacccccgccttcacgactccgactcggtactcagtctggtagccaaaagttgt
caccagagcggtgggaggtggtctgtcacctttgacatgtcctccatctctgcaagtgac
aatgtccagcgctttgagctgcggatccgcctgcctaccttctctgcctctgagcgtgtc
actgtggacatgtaccactcccagagtggccgctgctccagcccgccatgcccagagagc
ctcttcctgggctgcctgagggcagagcccagctccctgaccgccatgtccaactggagg
gtgttcaatgtcaccgcactgctccgctactactggctgcaccagggaggctccgcacct
tgccatgaagagggaagggcagaggagagagaggagggtctggagaggctcctgcacccc
acagccgaccgggtcatgatggtggtcttctccaagcaccagacagagaagcgggccccc
accctcatccgcactgctgagcattccaagtacgtctctctggaccgggagcgagctgga
gcaggccctgctgtcagcgtagagggtggaaagggggcccgccgcaggaagaggcgcggg
cagtaccagagagcaggagtggctggggtggcccctggtgtggcccccacggaggagagg
aagggcccgctgtgcaggaaggtagacatgtgggtgcactttgaccagatcggctggagc
gagtggattgtttaccccaagcgctataacgcgtaccgctgtgagggcagctgccctacc
ccagtggacgagaccttcagccccaccaaccatgcttacatgcagagtctactgaagctt
caccacccagatcgtgtcccgtgcccgtcctgtgtgcccacccgcctggcccctctgtcc
atgttgtattacgaaaacggcgaggtgctgatgcagcactttgagggcatggtggtggag
gagtgtggctgccactga
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