Coregonus clupeaformis (lake whitefish): 123492728
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Entry
123492728 CDS
T08357
Name
(RefSeq) phosphoinositide 3-kinase regulatory subunit 4-like isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04136
Autophagy - other
cclu04140
Autophagy - animal
cclu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
123492728
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123492728
04136 Autophagy - other
123492728
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
123492728
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
123492728
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
123492728
Protein kinases [BR:
cclu01001
]
Serine/threonine kinases: Other
VPS15 family
123492728
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
123492728
Autophagy
Autophagosome formation proteins
PI3K complex
123492728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
WDR55
HEAT
Beta-prop_EML_2
PK_Tyr_Ser-Thr
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
EIF3I
NBCH_WD40
Adaptin_N
Beta-prop_CAF1B_HIR1
HEAT_EZ
HEAT_2
Beta-prop_Vps41
Beta-prop_EIPR1
CEP104-like_TOG
Beta-prop_EML
Cnd1
TCAD9
Tti2
APH
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
123492728
NCBI-ProteinID:
XP_045081679
LinkDB
All DBs
Position
2:complement(3082000..3099514)
Genome browser
AA seq
1343 aa
AA seq
DB search
MGNQLAGIAPAQILSVDSYFSDIHDHEYDKSLGSTRFFKVARAKHREGLVVVKVFAIQDP
SLPLTSYKQELEELKIRLHSCQNCLPFQKASLTEKAAILFRQYVRDNLYDRISTRPFLNN
VEKRWLAFQILTAVDQAHKSGVRHGDIKTENVMVTSWNWVLLTDFASFKPTYLPEDNPAD
FNYFFDTSRRRTCYIAPERFVDGSMFTTDSDQNTPLVDLTSNSQRSRGELKQAMDIFSAG
CVIAELFTEGVPLFDLSQLLAYRKGHFQTEHVLMKIEDCYIRELVAQMVQREPEKRLTAE
EYLKQQRGNAFPDIFYTFLQPYMAQFAKETFQSADERVLVIRKDLDNILHNLRGGGPGGS
SEKPEKGDQESGVVSAKEEQGLVVLVSVITSCLQTLRSCDSKLAALELVLHLAGRLRVET
LLDRITPYLLHFCSDPAPRVRAQAVHTLAKVLALVKEVPRNDVNIYPEYILPGIAHLAQD
DATIVRLAYAENIAHLAETALRFLELVQENNLNMEHDLNGEDTEETLHPNENYDSELQAL
HEMVQQKVVTLLSDSENIVKQSLMENGITRLCVFFGRQKANDVLLSHMITFLNDKNDWHL
RGAFFDSIVGVAAYVGWQSSSILKPLLQQGLSDAEEFVIYKALNALTCMCQLGLLQKPHI
YEFVSDIAPFLCHPNLWIRYGAVGFITVVAQHLNIADVYCKLMPHLNPFITQPIIQIDKE
IVLLSVLKEPVSRSIFDYSLRSKDIGSLFRHLLLRQKKRRGSLPECPIPEDPAIAQLLKK
LLSQGMTEAEEDKLLALKDFMLKSNKAKANMGDQSHLGEAVQSGVIDLATLGIMGRQVDL
VKPKQEVEDKRARKHTKQDSNMNEEWKSMFGSQEPAATAPQPPTVPEGAGTQTRKSTASP
GVPVGQSAGAVSTYQRRLNTCKAELQHLVQQKREQCSAERMAKQMMESAEWESRPPPPGW
HPKGLLVAHLHEHKSAVNRIRVSDEHSIFATASNDGTVKVWDSQKMEGKTTTTRSVLTYS
RIGGHVKTLTFCQGSHYLAAASDNGSIQLLAIEANKPPKSPKVNPFQTRFLDQKDDGCVV
DVHHFNSGAQSVLAYATVNGSLVGWDLRSNSNAWTLRHDLRLGLITSFTVDMHQCWLCLG
TSSGTMACWDMRFQLPISNHSHPARARIRRLLMHPLYQSSVIAAVQGNNEVSMWDMETGD
RKFTLWASSAPPLSEMQPSPHSVHGIYCSPADGNPLLLTAGSDMRIRFWDLAYPERSYIV
AGGANEPLHCPSVLYSRKIIEGTEVVQEIHSKQKSGATEDTPRRGPESLPVGHHDIITDI
ATFQTTQGFIVTSSRDGIVKVWK
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atggggaatcagctggcagggatcgctcccgcccagattctatctgtcgacagctacttc
tctgatatccatgatcacgagtatgacaagagcctgggcagcacgcgcttcttcaaggtg
gcacgcgccaagcacagggaaggcctggtggtggtgaaggtgtttgccatccaggaccca
tctctacctctcaccagctacaagcaggagctggaggagctaaagatcagactacattcc
tgccagaactgcctgcccttccagaaggcctccctcactgagaaagcagccatcctcttc
cgccagtatgtccgggacaacttgtatgatcgcatcagcacgcggcccttcctcaacaat
gtagagaagcgctggctagccttccagatcctcaccgccgtagaccaggcgcacaaatcg
ggcgtgcgccacggtgacattaagaccgagaacgtgatggtgaccagctggaactgggtg
ctgctcacagactttgccagcttcaagcccacttatctgcccgaggacaacccagctgac
tttaattacttctttgacacatctcgacggaggacatgttacatcgcccccgagaggttt
gtggatgggagtatgttcaccacagacagtgaccagaatacccctctggtggacctcacc
agcaacagccagaggagcaggggagagctcaaacaggccatggatatcttctcagcaggt
tgtgtgatcgcagaactcttcacagagggagtaccactgttcgatctctcccaacttctg
gcgtatcgcaaaggacacttccagacagagcacgttctcatgaaaatagaagactgttac
atcagagagctagtggcccagatggtgcagcgggagccggagaagcgtctaactgcggag
gagtacctgaagcagcagagaggtaatgccttcccagacatcttctacaccttcctgcag
ccctacatggcccagtttgccaaggagaccttccagtcggcagacgagcgtgtgctggtc
atccgcaaggacctggacaacatcctccataacctccgcgggggagggccaggcgggtcc
tcggagaagcctgagaagggggaccaggagtcgggtgtggtgtcggccaaggaggagcag
ggcctggtggtgctggtgtctgtcatcacctcctgcctccagacgctgcgttcctgcgac
tccaagctggcggctctggagctggtgctgcatctggcgggccgcctcagggtggagacg
ctgctggaccgcatcacgccatacctgctgcacttctgcagcgacccggcgccgcgggtt
agggcccaggctgtgcacaccctagccaaggtgctggcactggtgaaggaggttccccgt
aacgatgtcaacatctaccccgagtacatcctgccaggcattgcccacctggcgcaggac
gatgccaccatcgtcaggctggcatacgcagagaacatagcccacctggctgagacagct
ttgcggtttttagagcttgttcaggagaataacctgaatatggagcacgacttgaacgga
gaggacacagaggagacccttcatcccaacgagaactacgactctgagctgcaggcgctg
catgagatggtacagcagaaggtggttacgttactgagcgactcagagaacatcgtcaag
cagtctctgatggagaacggcatcacgcggctctgtgtgttcttcggccggcagaaggcc
aacgacgtgctcctgtcccacatgatcaccttcctgaatgacaagaatgactggcacctc
cggggagccttcttcgacagcatcgtgggtgtggcggcgtacgtgggctggcagagctcg
tccatcctgaagcccctcctgcagcagggtctgagtgatgcggaggagtttgtcatctac
aaggccctcaacgctctcacctgcatgtgccagctgggcctgctgcagaaaccacacatc
tacgagtttgtcagtgacatcgccccattcctgtgccaccccaacctgtggatccgctac
ggggcggtgggctttattactgtggtggcccagcacctcaacatagcagacgtctactgc
aaactgatgcctcacctcaaccccttcatcacccagcccatcatacagatcgataaagag
atagtgctgctgagtgtgctgaaggagccagtgagccgctccatcttcgactactccctg
cgctccaaagacatcggcagcctcttccgccacctgctgctgcggcagaagaagcgcagg
ggctcactcccagaatgccccattccggaggaccccgccatcgcccagctgcttaagaaa
ctgctctcgcaggggatgacagaggctgaagaggacaagctgctagcactgaaggacttc
atgctcaagtccaacaaggccaaggccaacatgggagaccagagccacctgggggaggcg
gtccagagtggggtcattgacctggccacgctgggcatcatgggacgtcaggtggacctg
gtcaaacccaaacaggaggtcgaggacaagcgagcacggaaacacaccaaacaggactca
aacatgaatgaagagtggaagagcatgtttggctctcaggagccagcggctacagcacca
cagcccccgacggtgcctgaaggggcggggactcagaccaggaagagcacagcctcccct
ggtgtccctgtggggcagtctgcaggtgcagtctccacctaccagcgtcgtctcaacacg
tgcaaggcggaacttcaacatctggtgcagcagaagagggagcagtgcagcgcagagcgc
atggccaagcagatgatggagagcgctgaatgggagagccgtccgcctccgccagggtgg
caccctaagggtcttctagtggcccacctccatgagcacaagtctgctgtcaaccgtatc
cgtgtgtcagacgagcactccatcttcgccacggcctccaacgacggcaccgtcaaggtc
tgggacagccagaagatggagggaaaaaccaccaccaccaggtcagtgctgacgtactct
cgcatcgggggccacgtgaagacgttgaccttctgtcaggggtcacactacctggctgct
gcctcagacaacggttccatccagctcctggccattgaggccaacaagcctcccaaatca
cccaaggttaacccctttcagaccaggttcctggaccagaaggatgacggctgcgtggtg
gacgtccaccattttaattctggagcccagtctgtgctggcctacgccacggtgaacggc
tccctggtgggctgggacctgcgctccaactccaacgcctggaccctccgccacgacctc
cgactgggccttatcacctccttcaccgtggacatgcaccagtgctggctctgcctaggt
acaagcagcggcactatggcatgctgggacatgcggttccagctccccatctcaaaccac
tcccaccctgcccgagcacgaatcagacggctgctcatgcacccgctctaccaatcctcc
gtcatcgctgcagtccagggcaacaatgaggtatccatgtgggacatggagactggggac
aggaagttcacgctgtgggccagctctgctccccctctctcagagatgcagccgtccccc
cacagtgtccatgggatctactgcagccctgcagacgggaaccccctcctcctcacagcc
ggctccgacatgagaatcaggttctgggacttggcctacccagagaggtcctacatcgtg
gcaggtggagccaatgaaccgctgcactgtccctcagtcctctacagccgcaagatcatc
gagggcaccgaggttgtacaggagatccacagcaaacagaagagtggagccacagaggac
accccgcgcaggggccccgagtccctccccgtgggccaccatgacatcatcactgacatc
gccaccttccagaccacacagggcttcatcgtcacttcgtccagagacggcatcgtcaaa
gtctggaaataa
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integrated database retrieval system
