Coregonus clupeaformis (lake whitefish): 123492853
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Entry
123492853 CDS
T08357
Name
(RefSeq) histone deacetylase 3-like isoform X1
KO
K11404
histone deacetylase 3 [EC:
3.5.1.98
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
123492853
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
123492853
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
123492853
HDAC complexes
SMART complex
123492853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
123492853
NCBI-ProteinID:
XP_045082136
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All DBs
Position
2:5998124..6004168
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AA seq
428 aa
AA seq
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MSNRTAYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMQVFKPYKASQHDMCR
FHSEDYIDFLQKVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNH
KICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEA
FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVI
KQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFRIPLLVLGGGGYTV
RNVARCWTYETSLLVDEPISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRS
TVFENLKMLNHSPSVQIHDVPSDILSYERTDEGDPDERGSEDNYSRPEAANEFYDGDHDN
DKESDVEI
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacagaacagcatatttttatgatccggacgtggggaactttcattatggtgca
ggtcaccctatgaaaccccatcgtctctctctgacgcacagccttgttttgcactatggc
ctctacaaaaagatgcaggttttcaaaccatacaaagcctcacaacacgacatgtgccga
ttccactcagaagattacatagactttctgcagaaggtcagccccaacaatatgcagggt
ttcacaaagagtctcaacacctttaatgttggggatgactgccctgtattcccaggcctg
tttgagttctgctccaggtatacaggagcatctctacagggagcaacacagctaaaccac
aagatatgtgacatcgccatcaactgggccgggggtcttcatcatgccaagaaatttgaa
gcctctggattttgctatgtgaacgacattgtcatcagtatactggagcttctgaagtac
cacccgcgtgtgttgtacatagacattgacattcaccatggcgatggggtgcaggaagcc
ttctacctgactgatcgggtcatgactgtatccttccacaagtacgggaactacttcttt
ccaggaacaggtgacatgtatgaggtaggggcagagagtggccggtactactgcctgaac
gtgcctctccgggatgggatcgatgaccagagctacaggcaactctttcagccagtcatc
aagcaagtggtggacttttaccagccaacctgtatcgttcttcagtgtggggctgactcg
ctgggctgtgacagattagggtgcttcaacctcagtatacgaggccatggggagtgtgtg
gagtttgtgaagagctttaggattccactgctggtactgggaggaggagggtacacagta
cgcaacgtggccagatgctggacctatgagacctccctcctggttgatgagccaattagt
gatgagctgccttatagcgagtactttgagtattttgctccagacttcacgctccaccca
gacgtcagcaccaggatagagaaccagaactccagacagtacctggaacagatccgttcg
acggtctttgagaacttgaagatgttgaaccattcccccagtgtccagatccacgatgtg
ccctcggacatcctgagctacgagcgcactgatgagggagacccagatgagagggggtca
gaggacaactattccaggccagaggcagccaatgagttctacgatggtgaccatgacaac
gacaaggagagcgatgtggagatctga
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