Coregonus clupeaformis (lake whitefish): 123493066
Help
Entry
123493066 CDS
T08357
Name
(RefSeq) sodium/calcium exchanger 1-like isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
123493066
04020 Calcium signaling pathway
123493066
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
123493066
04261 Adrenergic signaling in cardiomyocytes
123493066
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
123493066
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
123493066
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
123493066
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Others
123493066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
123493066
NCBI-ProteinID:
XP_045082690
LinkDB
All DBs
Position
18:complement(6102709..6152021)
Genome browser
AA seq
973 aa
AA seq
DB search
MGQTGTSSFLFSTLQLTVLLAVFSSEIKFVTAGNSDPSLGTNSSIGNQTNKKCDSVGTEC
QEGVILPIWLPENPSFGDKLARATVYFVALFYMFLGVSIIADRFMASIEVITSQEKEITI
KKPNGEKVTTTVRIWNETVSNLTLMALGSSAPEILLSVVEVCGHNFNAGDLGPNTIVGSA
AFNMFVIIGFCVSVIPDGEHRKVKHLRVFFVTATWSIFAYTWLYLILAVISPGIVQVWEG
LVTLFFFPLCVGMAYVADRRLLVYKYMYKRYRAGKRRGVIIETEGEAQFPSKMDIEMDGK
MLNSEGFMDGAMGFDEKDLDEEEARREMTRILKELKQKHPEKETEQLIELANYQVLTQQQ
KSRAFYRCQATRIMTGAGNVLKKHAADQARKAIGAYEIRSDVSENDFSSKIFFDPGTYQC
LENCGTVALNVVRLGGDLTNTVSVEYRTEDGTANAGSDYQFTEGIVVFKPGETEKEIRID
IIDDDIFEEDEHFLVHLSNVKVISEGTGYGQPSANHVDTLAGLGLPCSATVTIFDDDHAG
IFTFEEPVMTVSESIGMMEVKVLRTSGARGLVVVPYKTMEGTAKGGGEDFEDTHGVLEFQ
NDEIFKTIQINIIDDEEYEKNKNFFLEMGEPQLLEMSERKAVLLQEVGGFVKTDKRLYGR
DVYRKVQGRDNPVPTTIISIAEEGDEEALSKKEEEERRIAEMGRPTLGEHVKLEVVIEES
YEFKNTVDKLIKKTNLALLIGTNSWRQQFMEAITVSSGDDDEDECGEEKLPSCFDYVMHF
LTVFWKLLFAFVPPTDYWNGWACFVVSISMIGLLTAFIGDLASHFGCTVGLKDSVTAVVF
VALGTSVPDTFASKVAAIQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHNSKGNDF
RVDPGTLAFSVTLFTIFAFVAVAVLMYRRRPEIGGELGGPRGPKIATTCLFFSLWLMYIV
FSSLEAYCHIKGF
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaactgggacatcatctttcctcttcagtactcttcaactcacagtgttgttg
gcagttttttcatctgaaattaaatttgttacagcagggaattcagacccaagcctcgga
acaaactcttccattggcaaccaaactaacaagaaatgtgattcagtggggactgaatgc
caagagggtgtcattctgcccatatggttaccagagaacccatcctttggtgataaactg
gcaagagccacagtttactttgtggccttgttttacatgttcctgggggtctctatcatt
gcggatcgcttcatggcatccatcgaggtaattacatcacaagagaaggagatcaccatc
aagaaaccaaatggcgaaaaagtgacaaccaccgtgcgtatatggaacgagacagtgtcc
aacctgacccttatggccctgggttcctccgccccggaaatcctactgtccgtcgttgag
gtgtgcggtcacaactttaacgcaggtgatctgggcccgaacaccatcgttggcagtgct
gccttcaacatgttcgttatcattggattctgcgtttctgtcattcccgatggagagcac
cggaaagtcaaacatttgagggtattctttgttaccgccacctggagtatatttgcatac
acctggctttatctcatcttggctgttatctcccccggcatcgtacaggtgtgggagggc
cttgtcacactgttcttcttccccttgtgtgtggggatggcttacgtcgcagatcgcaga
cttcttgtctataagtacatgtacaagcgctaccgcgcagggaagcgaagaggggtgatc
attgagacggaaggggaggcgcaatttccttcaaagatggacattgaaatggacgggaaa
atgctcaactcagagggcttcatggacggagcgatgggtttcgatgagaaggacctggat
gaggaggaggccaggagggaaatgacccggatcctgaaggaacttaagcagaagcatcca
gagaaggagacggagcagctgatagaactggccaactaccaggtattaacacagcagcaa
aagagtcgcgccttctaccgatgccaggctaccaggatcatgacgggagcagggaacgtt
ctgaagaagcatgcagcagaccaagccaggaaagccattggtgcgtacgagatccgctcc
gatgtttcggagaatgacttttcgtcaaagatcttctttgaccccggtacataccagtgc
ttggagaattgcggtacagtggccttgaatgtcgtacgccttggtggggacttaactaac
actgtttcagtggaataccgtaccgaagatggcacagccaatgctggctcggactaccag
ttcactgagggcattgtggtgttcaaacctggtgagactgagaaggagatccggatagac
atcattgatgatgacatctttgaggaggatgagcattttctggtccaccttagcaacgtg
aaggtcatatcggagggcactggctacggacaaccaagtgctaatcacgtggacactttg
gcgggccttggcctaccctgctcagccaccgtgactatctttgacgatgaccatgccggg
atcttcactttcgaagaaccggtaatgaccgtgagcgagagtatcggcatgatggaagtg
aaggttcttcgtacctcaggagcacggggactagtggtcgtaccctacaagaccatggag
ggtacagcaaaaggagggggagaagactttgaagatacgcacggagtgctggagttccag
aacgatgagatcttcaaaactatacagatcaatataatcgatgacgaggagtatgagaaa
aacaagaacttcttccttgagatgggagagcctcagctgctggagatgagtgagaggaaa
gctgtgttgcttcaagaagttggtggattcgtgaagacagacaaaaggctttatggcagg
gacgtctaccggaaagtgcagggtagggataaccctgtccccaccaccattatcagcatt
gcagaggaaggggacgaggaggctctctccaagaaggaggaggaggaacgtcgcatcgct
gagatgggccggcccaccttgggggagcacgtcaaactggaagtggtcatcgaggagtcg
tatgagttcaagaacacagtggataagctgattaagaagaccaacctggctctattgatt
ggaaccaatagctggaggcagcagtttatggaagctatcacagtcagctctggcgatgat
gacgaggacgagtgcggtgaggagaagctgccctcctgctttgattacgtcatgcacttc
ctcaccgtcttctggaagctcctgttcgcctttgtgccgcccaccgactactggaacggc
tgggcctgcttcgtggtctccatcagcatgattggcctgctcaccgccttcatcggagac
ctggcctcccactttggctgtactgtgggcctcaaggactccgtgaccgccgtggtgttt
gtggcacttggaacgtctgtgccagacacgtttgccagcaaggtagctgcaatccaggac
cagtacgctgacgcctccatcggcaatgtaacgggcagcaatgccgtcaatgtcttcttg
ggcatcggcgtggcctggtccatcgccgctatctaccacaattccaagggcaacgatttc
cgggtggacccgggcaccctggccttctccgtcaccctattcaccatcttcgcctttgtc
gccgtggccgtgctcatgtaccgccgccgacccgagattgggggtgagctgggtgggccc
cggggccccaaaatcgcgaccacctgtctcttcttcagcctgtggctcatgtacatcgtc
ttctcctccctggaagcttattgccacattaagggcttctag
DBGET
integrated database retrieval system
