KEGG   Coregonus clupeaformis (lake whitefish): 123493085
Entry
123493085         CDS       T08357                                 
Symbol
rack1
Name
(RefSeq) guanine nucleotide-binding protein subunit beta-2-like 1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03010  Ribosome
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    123493085 (rack1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    123493085 (rack1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    123493085 (rack1)
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     123493085 (rack1)
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   123493085 (rack1)
  Exosomal proteins of colorectal cancer cells
   123493085 (rack1)
  Exosomal proteins of bladder cancer cells
   123493085 (rack1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_Gbeta WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_EIPR1 DSE1_N TRM82_WD Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_VPS8 ANAPC4_WD40 Beta-prop_Aladin Beta-prop_TEP1_C ASA1 Beta-prop_DCAF12 CFAP251_N Beta-prop_WDR41 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_NOL10_N PAC11 Beta-prop_DCAF4 Beta-prop_IFT140_1st eIF2A Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 Tricorn_2nd Cytochrom_D1 Beta-prop_pof12 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 123493085
NCBI-ProteinID: XP_045082874
UniProt: W5S4E5
LinkDB
Position
2:complement(21323800..21327821)
AA seq 317 aa
MTEQMTVRGTLKGHNGWVTQIATTPQFPDMILSASRDKSIIMWKLTRDETNYGIPQRALK
GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQI
VSGSRDKTIKLWNTLGVCKYTIQDESHSEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLA
NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDNINALC
FSPNRYWLCAATGPSIKIWDLEGKIIVDELRQEVISTNSKAEPPQCTSLAWSADGQTLFA
GYTDNLIRVWQVTIGTR
NT seq 954 nt   +upstreamnt  +downstreamnt
atgaccgagcagatgacagtaagggggaccctaaaggggcataatggttgggtcacccag
atcgcgactacccctcagtttcccgatatgattctgtctgcatcccgagacaagtctatc
atcatgtggaagctgacccgtgatgagacaaactatggcatcccccaacgcgcccttaag
ggacactctcactttgtgagcgacgtcgtcatctcctcagatggacagttcgcgctgtct
gggtcctgggatggaaccctccgtctgtgggacctcaccactggcaccaccacccgccgc
tttgtgggccacaccaaggacgtcctgagcgtggctttctccgctgacaaccgccagatc
gtgtctggttcccgggacaagaccatcaagctgtggaacaccctgggagtctgcaagtac
accatccaggatgagagtcactctgagtgggtgtcctgtgtgcgcttctcccccaacagc
agcaaccccatcatcgtctcctgtggttgggacaagatggtcaaggtgtggaacctggcc
aactgcaagctgaagactaaccacattggccacactggctatctgaacacagtgactgtc
tctcccgatggctccctctgcgcttctggtggaaaggacggtcaggccatgctgtgggac
ctcaacgagggcaagcacctgtacaccctggatagtggtgacaacatcaacgccctctgc
ttcagccccaaccgatactggctctgtgccgccaccggtcccagcatcaagatctgggat
ctggagggtaagatcattgtggatgagctaagacaggaggtgatcagcaccaacagcaag
gccgagcccccacagtgcacctctctggcctggtctgctgacggacagaccctgtttgct
ggctacaccgataacctgatccgagtgtggcaggttaccatcggaacccgataa

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