Coregonus clupeaformis (lake whitefish): 123493090
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Entry
123493090 CDS
T08357
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
123493090
04121 Ubiquitin system [BR:
cclu04121
]
123493090
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
123493090
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
123493090
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
hAT-like_RNase-H
L544_NTransf
Motif
Other DBs
NCBI-GeneID:
123493090
NCBI-ProteinID:
XP_045082888
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Position
18:53866271..53868361
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AA seq
406 aa
AA seq
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MWSSRTAEPYQSLTVHFIDEDFNLRARCLQTTYFPDDHTGENIAAGLREGLVSWDLHEEN
HVCITTDNASNMVLAARLNEWTRLQCFGHRLHLAIENALKDDRVSRATALCRKLVGHFSH
SWKKKAALTEAQRELKLPEHNLITECPTRWGSKEMMIARVLEQAKAISQVLSGDRYARSL
IPTWQDIDVLESIHKALHPLLEFTDALSGEEYVSISYLKPVLHLFATSVLAEDAEDTDLT
KSIKTKVLAYLNNKYGDPNIQELLDVACFLDPRFKIQYISTDNIPAIKTRLKTEIVDLAQ
RTYHWEKRSRTETVQMPQSAQSLGEKTKRSLGSFFKTSSASPSLPVNLEDVAEAEINNYL
MTPTIDGEDDPLAWWRVHKISYPQLCTMARKYLCVPATSAPSERLF
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcaagccgcacagctgagccgtaccagagtcttacagtccattttattgatgaa
gatttcaacctccgagctcgctgcctacaaactacctacttcccagacgatcacacaggg
gaaaatattgcagccggcctgagagaagggcttgtcagctgggatctccacgaggagaat
cacgtctgcatcacgacggacaacgcgtcgaatatggtgcttgctgcgcggcttaatgaa
tggacgaggctccaatgttttggccacagattacatcttgccattgaaaatgcactcaaa
gatgacagagtgtcaagggcaacagcactgtgcaggaagctggtggggcacttttcccac
agttggaagaagaaagcagccctgacggaggcacagagagagctcaaactccctgagcac
aacctcataacggagtgcccaacaagatggggttctaaagaaatgatgattgccagagtg
cttgaacaggccaaagccatttctcaggtattgtctggagatcgatatgcacgctccctt
atcccaacctggcaggatattgacgtgttggagtcgattcacaaggcactgcatcctcta
ctggagtttactgatgctctttctggagaggagtatgtaagcatctcctacctcaagcca
gttctccacctttttgccacatcagtcctggctgaagatgctgaggacactgacctgact
aaatcaataaaaaccaaagtcctagcatacctcaataacaaatatggagacccaaacatc
caggagcttttggatgttgcctgtttcctggaccctaggttcaaaatacagtacatcagt
acagacaacatccctgctatcaagactcgtctgaagacagagatagtagacttggcacaa
cgtacatatcattgggagaagaggtctcgtactgaaactgttcagatgcctcaaagtgca
cagtccttgggggaaaagacgaagaggtctcttggcagttttttcaagaccagttcagcc
tctccttctttgcctgtaaatcttgaagatgtcgcagaggcagagataaacaattacctg
atgactcctaccattgatggagaagatgatccattggcttggtggagggtgcacaagatc
agctacccacagttgtgcaccatggcacgcaagtatctttgtgtacctgctacaagcgct
ccctcagagcgtcttttttag
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