Coregonus clupeaformis (lake whitefish): 123493101
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Entry
123493101 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like
KO
K09662
N-acetylglucosaminyltransferase 3, mucin type [EC:2.4.1.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00512
Mucin type O-glycan biosynthesis
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
123493101
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
123493101
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
O-Glycan
123493101
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Motif
Pfam:
Branch
Motif
Other DBs
NCBI-GeneID:
123493101
NCBI-ProteinID:
XP_045082931
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Position
18:complement(6014776..>6016290)
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AA seq
403 aa
AA seq
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SLFSSGTLRRPTCSERSPLPEPDLLPQDYADDLPACSAIIRGDLKGIDKEQLRRLLXKQK
NNPKLLSEAFYHDVIRNCKTYVTDRGFVMMPLSVEERDFPIAYSMVVHEKIEMFERLLRA
VYTPQNVYCVHVDQKSSEEFRTAVKAIVSCFTNVFVASKTESVVYASWSRVQADLNCMRD
LLKSPVHWRYLLNTCGTDFPIKTNAEMVQSLKLLNGRNSMESETTIDXKKRWWQYQHNIT
NNIVVRTGVTKSPPPISNHMFSGNAYFVVSRDFVHHLFDSQEVRALLEWERDTYSPDEHL
WATLQCMPSVPGSNPPHIKYHESDMNAIARMVKWSYLEGDVRKGAPYPPCSGASRRAMCV
YGAGDLRWLLQHHHLIANKFDPEVDDVAIRCLESYLRFKATYG
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
tctctcttctcctctggaacactcagacgcccaacctgctctgagaggagcccgctccca
gaacctgacctcctgccacaagactacgcagacgacctgccagcctgctcagccatcatc
agaggagacctgaagggcattgacaaggagcagctcagaagacttctgnnaaaacaaaag
aataatcccaagcttctatctgaggcgttctaccatgacgtgatccgaaactgtaaaact
tacgttacagacagagggttcgtcatgatgccccttagtgtggaggagagagacttcccc
atcgcctactccatggtggtccatgagaagattgagatgtttgagcgactcctgcgtgcc
gtgtacacacctcagaatgtatactgcgtgcatgtggaccagaaatcctctgaggaattc
aggactgcagtaaaggctattgtgtcttgttttaccaatgtgtttgtggcaagtaagaca
gagagtgtagtttacgcatcgtggtctcgagtgcaggcagatctaaactgtatgagggac
ctgttgaagtcacctgtccattggaggtacctgctcaatacctgtggaacagatttcccc
attaaaaccaacgcagagatggttcagtcactcaaactgctcaacgggaggaacagcatg
gagtctgagaccaccatcgactaaaagaaacgctggtggcagtatcagcacaacatcacc
aacaacatagtggtcaggacgggcgttacgaagagccctcctccaatcagcaaccacatg
ttctccggaaatgcctatttcgtggtctccagggactttgtccatcacttgtttgacagc
caggaggttcgggccctgctggagtgggagagggacacctacagtcctgatgagcacctg
tgggctactctgcagtgcatgccctcagtgccagggtctaaccctccccacattaagtac
catgaatcagacatgaacgccatcgctcgcatggtgaagtggagttacctggaaggagat
gtgaggaaaggagccccatatccaccctgctccggtgcctccaggagagctatgtgtgtc
tacggggctggagatctccggtggctcctacaacaccaccacctcatcgctaacaagttt
gacccagaggtggatgatgtagccattcgatgtctggaatcataccttcgtttcaaagca
acatatggttaa
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