Capnocytophaga canimorsus: Ccan_01190
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Entry
Ccan_01190 CDS
T01582
Name
(GenBank) DNA repair protein sms-like protein
KO
K04485
DNA repair protein RadA/Sms
Organism
ccm
Capnocytophaga canimorsus
Brite
KEGG Orthology (KO) [BR:
ccm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccm03400
]
Ccan_01190
DNA repair and recombination proteins [BR:
ccm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ccan_01190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
DnaB_C
AAA_22
ChlI
Zn_ribbon_LapB
AAA
Lon_C
AAA_24
AAA_5
AAA_16
AAA_14
CobU
TniB
NTPase_1
Rad51
ABC_tran
NACHT
ATPase_2
RsgA_GTPase
nSTAND3
Cas_APE2256
DZR
AAA_18
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AEK22241
UniProt:
F9YPZ6
LinkDB
All DBs
Position
138154..139512
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AA seq
452 aa
AA seq
DB search
MAKVKTAYFCQHCGTQYSKWQGQCYGCKQWNTIVEEVVQTEEKKAWQEPEAKPKKVKYIS
LSEIDSAQETRLKTNNNELDNVLGGGLVPGSVTLLGGEPGIGKSTLLLQIALNLPYKTLY
VSGEESEKQIKMRADRIKKNTGNCYVLTEIKTQHIFQQIKELKPQILIIDSIQTLQSDYI
EASAGSVSQIRECTSELIKFAKTTHVPVILIGHITKDGHIAGPKILEHMVDTVLQFEGDR
NHVYRILRALKNRFGSTSELGIFEMLGDGLREVNNPSEVLISKTEETISGTAIAATLEGM
RPLMIEIQALVSTAVYGTPQRSATGFNAKRLNMLLAVLEKRAGFRLGAKDVFLNITGGFT
LDDPATDLGVVMAILSSNEDIAIEKNVCFAAEIGLGGEVRPVQRVEQRITEAEKLGFETI
FISKYSKLAIKNPAIKVVKVAKIEEAIQILFG
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggtaaaaacagcgtatttctgtcagcactgtggtacacaatacagcaaatgg
caaggtcaatgttacggatgtaagcagtggaacaccattgtagaggaagtggttcaaact
gaagaaaaaaaagcgtggcaagagccagaagctaaacctaaaaaagtaaaatacatttcc
ctttctgaaattgattcagcacaagaaactcgcttaaaaaccaataataacgaactggat
aatgtgcttggaggaggcttggtacctggttcggttaccttgcttggaggcgaaccaggt
ataggtaaaagtacacttttgcttcaaatagcgcttaatttgccttacaaaacgctctat
gtttctggggaagaaagcgaaaaacagataaaaatgcgagcagatcgtatcaaaaaaaat
acgggaaactgctatgtactgaccgaaatcaaaacccaacatatatttcagcaaattaaa
gagctcaaacctcaaatcctgattattgactccatacaaaccctacaatcggactatata
gaggcttcggcaggaagtgtatcgcaaattcgcgaatgtacctccgagctaataaaattt
gctaaaaccacccacgtacctgtcattttgattgggcatatcaccaaggacggtcacatt
gctggtccgaaaatattggagcatatggttgataccgtacttcagtttgagggcgatcgc
aaccacgtgtatcgtattttacgcgctttaaaaaatcgttttggttctacttctgaattg
ggtattttcgagatgttgggcgacggtttgcgcgaagtaaacaatccttcagaagtgctt
atttcgaaaacggaagaaaccattagcggaacagccattgctgcaactttggaaggaatg
cgtcctttaatgattgaaattcaagccttggtaagtacggccgtttacggaacgccacaa
cgaagtgcaacggggtttaatgccaaaaggctcaatatgttattggcagtacttgaaaaa
agagctggttttcgtcttggagccaaagacgttttcttgaacattactggaggtttcact
ttggacgaccctgccacggatttaggagtggtaatggcaatactttcttccaatgaagat
attgctattgagaaaaatgtgtgttttgctgctgaaattggtttagggggcgaagttcgt
cctgtacagcgtgtggaacaacgcattaccgaagctgaaaaattaggcttcgaaaccatt
tttatttccaaatacagcaaattggcaataaaaaatcctgcaataaaagtggtcaaagtg
gctaaaatagaggaagctattcaaatcctttttgggtaa
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