Capnocytophaga canimorsus: Ccan_01450
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Entry
Ccan_01450 CDS
T01582
Name
(GenBank) groEL protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ccm
Capnocytophaga canimorsus
Pathway
ccm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ccan_01450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccm03019
]
Ccan_01450
03110 Chaperones and folding catalysts [BR:
ccm03110
]
Ccan_01450
03029 Mitochondrial biogenesis [BR:
ccm03029
]
Ccan_01450
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccm04147
]
Ccan_01450
Enzymes [BR:
ccm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Ccan_01450
Messenger RNA biogenesis [BR:
ccm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Ccan_01450
Chaperones and folding catalysts [BR:
ccm03110
]
Heat shock proteins
HSP60 / Chaperonin
Ccan_01450
Mitochondrial biogenesis [BR:
ccm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Ccan_01450
Exosome [BR:
ccm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Ccan_01450
Exosomal proteins of other body fluids (saliva and urine)
Ccan_01450
Exosomal proteins of breast cancer cells
Ccan_01450
Exosomal proteins of colorectal cancer cells
Ccan_01450
Exosomal proteins of bladder cancer cells
Ccan_01450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
AEK22267
UniProt:
F9YQ99
LinkDB
All DBs
Position
156118..157749
Genome browser
AA seq
543 aa
AA seq
DB search
MAKEIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIISKSFGSPQVTKDGVSVAKEIE
LEDALENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVTKVVEELGKQAKEVGSSSEKIQQVASISANNDESVGELIANAFDKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTDSEKMITELDRPYILLYDKKISTMKDLLPVLEPV
AQSGKPLLIIAEDIDGEALATLVVNKLRGALRIAAVKAPGFGDRRKAMLEDIAILTGGTV
IAEERGFILENATIDMLGTAEKVVIDKDNTTIVNGAGVADNITARVNQIKAQIETTTSDY
DREKLQERLAKLSGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALI
RAKGALSKLKSENADEATGIQIVVRALEAPLRTIVENAGGEGSVVVAKVLSGKDTFGYNA
KTDQYVDMLKAGIIDPKKVTRVALENAASVAGMILTTECALVDIKDEKGAAMPPMGGGMP
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaataaaatttgatatagaagctcgtgatggcttaaagcgtggtgttgat
gctttggcaaatgccgtaaaagtaactttaggacctaaaggaagaaatgtaattatcagt
aaatcattcggttcgcctcaggttaccaaagatggtgtttctgtggcaaaagaaatagaa
ttggaagatgcccttgaaaatatgggggctcaaatggtaaaagaagttgcttcgaaaacc
aatgatttagcaggtgacggaactaccacagctaccgttttggctcaagccattgttaaa
gaagggctcaaaaacgtggcagctggtgctaaccctatggatttgaaaagaggtattgac
aaagcggttaccaaagtggtagaagagcttggaaaacaagccaaagaggtgggcagttct
tccgaaaaaatccagcaagtagcctctatttctgcaaataatgacgaatcagtaggtgaa
cttatcgctaatgccttcgataaagtaggaaaagaaggtgtaatcactgttgaagaagca
aaaggaacagatacgtatgtagatgttgtggaaggaatgcagtttgacagaggttatttg
tcgccttacttcgttacagactctgaaaaaatgattactgagcttgatcgcccttacatt
ttgttgtatgataagaaaatatctacaatgaaagacttacttcctgttttagagcctgtt
gctcaatctggaaaaccccttttaatcatcgctgaagatattgacggagaggctttggca
accctagtggttaataaactaagaggagcgttgcgtattgctgccgtaaaagcgcctggt
tttggtgacagaagaaaagcgatgcttgaagatattgcaattttaaccggaggaactgta
attgctgaagagagaggatttatccttgaaaatgctactattgatatgctcggaaccgct
gaaaaagtagttattgataaagacaacaccactattgttaatggtgcaggtgtagctgat
aatattacagctcgagtaaatcagataaaagcacaaattgaaactacaacttccgattac
gatcgtgaaaaactacaagagcgtttggctaaactttcaggtggagttgccgttctttat
gtaggagcagcctctgaagtagaaatgaaagagaaaaaagatcgtgtggatgatgcgctt
cacgccactcgtgctgccgttgaagaaggtatcgttgctggaggtggtgtcgctttaatt
cgtgctaaaggtgctttgtctaagttaaaatctgaaaatgccgacgaagcaactggaata
caaattgtggtacgtgctttagaagctcctttaagaaccattgttgaaaatgctggtgga
gagggctctgtagtggtagcaaaagtattatcaggtaaagatacttttgggtacaacgcc
aaaaccgatcagtatgtagatatgcttaaagcaggtattatcgaccctaagaaagtaacc
cgtgtagctttagaaaatgcagcatcagttgcaggtatgattctgactaccgagtgtgct
ttggtagatattaaagatgaaaaaggagcagcaatgccaccaatgggcggaggaatgcca
ggaatgatgtaa
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