Capnocytophaga canimorsus: Ccan_05060 Help Entry Ccan_05060        CDS       T01582                                  Name (GenBank) Excinuclease ABC subunit A   KO K03701   excinuclease ABC subunit A Organism ccm  Capnocytophaga canimorsus Pathway ccm03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:ccm00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     Ccan_05060  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ccm03400]     Ccan_05060 DNA repair and recombination proteins [BR:ccm03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Ccan_05060   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       Ccan_05060 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ABC_tran UvrA_inter SMC_N AAA_21 UvrA_DNA-bind AAA_16 AAA_29 AAA_22 nSTAND1 RsgA_GTPase nSTAND3 AAA_15 DnaJ_CXXCXGXG AAA_33 ATPase ATPase_2 Viral_helicase1 BCA_ABC_TP_C NACHT cobW AAA_23 NTPase_1 T2SSE KORA Motif Other DBs NCBI-ProteinID:  AEK22626 UniProt:  F9YS73 LinkDB All DBs Position 550336..553098 Genome browser AA seq 920 aa AA seqDB search MKTKEILIKGAKLHNLKDITVGIPRNQLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLS SYARQFLGRLDKPKVDNIVGIAPAIAIEQKVNTSNPRSTVGTSTEIYDYLKLLFARIGKT YSPISGKEVKKHSVTDVVDAVLNYPERTKLLLLAPVHIAEGRKTPQVLQILLQQGYARIQ HKGEIIRIDEADLNSISSDFLLVIDRIIVQHDEDFKHRLADAVDTAFFEGKGECIIEEVE SQNKQTFSNRFELDGIEFFEPNVHLFSFNNPYGACPKCDGYGDTIGLDEELIIPNTALSV YDNCIFPWRGETMSWYRDQLVLNAYKFDFPIHKPWFELTKEQKQLVWKGNKFFTGLTDFF KELEEKSYKIQNRVLLARYRGKTKCNECEGKRLRKEADYVKINGKSISDLVDISIEELQT FFKELKLSDYERSIAKRLLVEIENRLQFLSDVGLNYLTLNRKSNTLSGGESQRINLATSL GSSLVGSMYILDEPSIGLHPKDTEKLIGVLKSLRDLGNTVIVVEHDEDIMKAADYIIDIG PEAGTHGGEVVAQGTYEEILNADSLTGKYLSKRMQIELPKERRTSPHYITLLGCRENNLK NIDVTLPLDMLTVVTGVSGSGKSTLIKRILYPAMLKELDINSDKAGQFSKLDGKYKHIQS VEFVDQNPIGKSSRSNPITYIKAYDDIRNLYASQKLSKLRNFQPKHFSFNVDGGRCEVCK GEGEVTIEMQFMADVHLPCEACGGKRFKKEVLEVTFEGKSIDDLLNTTIDDAVAFFEQHK QSKISSKLKPLQDVGLGYVTLGQSSSTLSGGEAQRIKLASFLAKSESKEKVLFIFDEPTT GLHFHDIRKLLASFQALIEKGHSIIVIEHNLEMIKSADYVIDLGLDGGDKGGTIIAQGTP EEIIRNKQSYTAKYLKEVMK NT seq 2763 nt NT seq  +upstreamnt  +downstreamnt atgaaaaccaaagaaatacttataaaaggagctaagcttcacaatttaaaagacattacg gttggcattccgcgtaatcaattggtagtgattacgggcttatcgggttcgggaaagtcc agcttggcgttcgacacactttatgctgaagggcaacgccgttacgtggaaagcctttcg tcttacgcacgtcagtttttaggaagacttgacaaacccaaagtggataacatcgtggga attgctcccgctatagctattgaacagaaagtcaatacttctaatccgcgttctaccgta gggacgtccacagaaatctatgactatttaaaattactcttcgctcgtatcggaaaaacg tactcgcccatttctggcaaagaagtgaaaaaacattctgttactgatgtagttgatgcc gttttgaactatcctgagcgaacaaaattactgcttttagctcccgtgcatattgccgaa ggtaggaaaacgccccaagtgcttcaaattttattacagcagggttatgcacgtattcag cataaaggcgaaattattcgcattgacgaagccgacctgaatagtataagttctgatttt ctgcttgttatcgaccgaattattgtacaacacgatgaagattttaaacatcgattagca gatgccgttgatactgctttctttgaaggaaaaggcgaatgcatcatcgaagaggttgaa agtcagaacaaacaaacattcagcaaccgatttgaattggacggcattgagttttttgaa cccaatgttcatttgtttagcttcaacaatccgtacggagcttgtcccaagtgcgacgga tatggcgataccattgggcttgatgaagagttaatcattccaaacacagctctttccgtg tacgataattgcatctttccgtggcgaggcgaaacgatgagttggtatcgcgatcagctg gttttgaatgcttacaagttcgatttccccattcacaagccgtggtttgaactcaccaaa gagcaaaaacaattggtttggaaaggcaataaatttttcaccggactgacagattttttc aaagaacttgaagaaaaaagttataaaatacaaaatcgagtactacttgcacgttatcgc ggaaaaaccaaatgtaacgaatgcgaagggaaacgcctacgcaaagaagctgattacgta aagattaacggcaaaagtatttcagatttagttgatatttccatagaagaattacaaact ttctttaaggagttgaaactttctgactacgaaagaagtatagccaaacgcttacttgtg gagattgaaaatcgattgcaattcctttcggacgtaggattaaactatctgaccctcaat cgtaagtcaaacacgctgtcaggcggagaaagccaacgtattaatttagcaacttcatta ggaagtagtttggtaggctcaatgtatattttggacgaacccagtatcggtttgcacccg aaagacactgaaaaactcatcggagtactcaaatcattacgtgatttgggcaacacggtg attgtagttgagcacgatgaagatattatgaaggcagccgattacatcattgatattggt cctgaggccggaacgcacggtggcgaggtagttgcacaaggtacttatgaggaaattctt aacgcagattcgctaacaggtaagtaccttagcaaacgaatgcaaatcgaacttccgaaa gaaagacgcacctctccgcattacatcacgctactgggttgtcgtgaaaacaacttaaaa aacatagatgttacacttccgttggatatgcttacggtagttacgggcgtttctggaagc ggaaaatcgacacttatcaagcgaattttatatcctgcgatgcttaaagaattggacatc aacagcgataaggcagggcagttctcaaaacttgacggaaagtacaagcacattcagtct gtggagttcgttgaccaaaacccgataggcaagtcctcacgctcaaacccaataacttat ataaaagcctacgacgatattcggaatttgtatgcctcacaaaaactttcaaagttgcgt aactttcagccaaaacacttttcattcaacgtagatggtgggcgttgcgaggtttgtaaa ggcgaaggcgaagttaccatcgagatgcaatttatggctgatgtacatcttccttgcgag gcctgtggcggaaaacgtttcaaaaaggaagtgttagaagtaacttttgagggcaagtcc attgacgatttactaaacaccactattgatgatgccgttgctttttttgaacaacataag caatcaaaaatcagctcgaaactaaaaccgcttcaagatgttgggctgggttatgttaca cttgggcagtcgtcttccacgttgtcaggtggagaggcacaacgcattaagttggcttct ttcttggcgaagtccgaaagtaaagagaaggtactattcatctttgacgaacctaccaca ggattgcattttcacgatattcgcaagttattggcttcctttcaggcacttatagaaaag gggcattccattatcgtgattgagcataacttagagatgataaaatcagccgattacgta attgacttaggattggacggaggcgacaagggcggaaccatcatcgcacaaggcactccc gaagaaattatccgaaacaaacagagctacacagctaaatacttgaaagaagtgatgaaa taa

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