Capnocytophaga canimorsus: Ccan_10870
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Entry
Ccan_10870 CDS
T01582
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
ccm
Capnocytophaga canimorsus
Brite
KEGG Orthology (KO) [BR:
ccm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccm03032
]
Ccan_10870
03036 Chromosome and associated proteins [BR:
ccm03036
]
Ccan_10870
03400 DNA repair and recombination proteins [BR:
ccm03400
]
Ccan_10870
DNA replication proteins [BR:
ccm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Ccan_10870
Chromosome and associated proteins [BR:
ccm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Ccan_10870
DNA repair and recombination proteins [BR:
ccm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Ccan_10870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_2
HTH_78
UBA_HYPK
Motif
Other DBs
NCBI-ProteinID:
AEK23203
UniProt:
F9YVN9
LinkDB
All DBs
Position
1156622..1156894
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIDAIAAQTGVSKSDAKKVLDSFLGNVENTLKKGGKVSLVGFGSWSVSKREAREG
RNPQTGKTIKIEAKNVVKFKPGSELNDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagaacttattgatgctattgcagcgcaaacaggagtttcaaaatcagat
gctaaaaaagtcttagattcttttttaggtaatgttgaaaacaccttaaaaaaaggtgga
aaggtatctttggtaggattcggctcttggtcagtttctaaaagagaagcaagagaggga
agaaatccgcaaacaggaaaaaccataaaaattgaagccaaaaatgtggttaaattcaaa
ccaggctcagaattgaatgacgcagttaattag
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