Capnocytophaga canimorsus: Ccan_11040
Help
Entry
Ccan_11040 CDS
T01582
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ccm
Capnocytophaga canimorsus
Pathway
ccm00260
Glycine, serine and threonine metabolism
ccm00460
Cyanoamino acid metabolism
ccm00630
Glyoxylate and dicarboxylate metabolism
ccm00670
One carbon pool by folate
ccm00680
Methane metabolism
ccm01100
Metabolic pathways
ccm01110
Biosynthesis of secondary metabolites
ccm01120
Microbial metabolism in diverse environments
ccm01200
Carbon metabolism
ccm01230
Biosynthesis of amino acids
ccm01240
Biosynthesis of cofactors
ccm04981
Folate transport and metabolism
Module
ccm_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ccm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ccan_11040
09102 Energy metabolism
00680 Methane metabolism
Ccan_11040
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Ccan_11040
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Ccan_11040
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Ccan_11040
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Ccan_11040
Enzymes [BR:
ccm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Ccan_11040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Phage_TAC_12
Motif
Other DBs
NCBI-ProteinID:
AEK23220
UniProt:
F9YVQ6
LinkDB
All DBs
Position
complement(1173315..1174589)
Genome browser
AA seq
424 aa
AA seq
DB search
MQRDQQIFELIEDEKERQIHGIELIASENFVSDQVMEAAGSILTNKYAEGYPGRRYYGGC
EVVDEIEQIAIDRAKALFGAEYANVQPHSGSQANTAVYAACLKPGDKILGFDLSHGGHLT
HGSPVNFSGKLYQPVFYGVEQETGRLNYDKIQEIAEREKPQLIIAGASAYSRDIDFKRFR
EIADKVGAILFADISHPAGLIAKGLLNDPIPHCHIVATTTHKTLRGPRGGLILMGKDFEN
PFGLKTPKGEVRMMSSLLDSAVFPGNQGGPLEHIIAAKAIAFGECLSDDFLHYAIQIQKN
AKKLAEILVSKGYDIISKGTDNHMMLIDLRNKNITGKEAEEALGKADITVNKNMVPFDTR
SPFVTSGIRIGVSAITTRGLKQQDMLQIAEFIDSAIVNHQDDETLEAIAEKVNEFMENRP
LFAY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtgaccagcaaatttttgaactcattgaagacgaaaaagaaagacaaatacac
ggtattgagctaattgcatcggagaattttgttagtgaccaagttatggaagcggcaggt
tctatattaactaacaaatatgcagaaggttatcctggtagaagatattatggaggctgc
gaggtagttgatgaaattgaacaaatagccattgacagagctaaggcacttttcggtgct
gagtatgctaacgtacagccacattcagggtcacaagccaacacagcggtttatgcagct
tgtttaaaacccggcgataaaattttaggttttgacctttcgcacggtgggcacctgaca
cacggttcaccagttaatttttctggaaagttatatcaacctgttttttatggtgtagaa
caagaaactggacgattgaattatgacaagatacaagaaatagccgaaagagaaaagcca
caactgatcattgctggagcttcagcttattctcgcgatattgatttcaaaagatttcgt
gaaattgccgataaggtaggcgctattctttttgctgatatttcacatccagctgggttg
attgccaaagggttactcaatgatcctattccgcattgtcatattgtggctaccactacg
cacaaaacactacgtgggcctcgtggcggacttattttgatgggtaaagattttgaaaat
ccattcggattaaaaaccccaaagggagaagttcgtatgatgtcgtctttattagatagc
gctgtttttccaggaaatcaaggaggtccgttagaacacattatcgcagctaaagccatt
gctttcggtgagtgtttatctgacgactttttacattacgccattcaaattcaaaaaaat
gcaaaaaaattagccgaaattttggtaagcaaaggctatgatattatctctaaaggaaca
gataatcatatgatgcttattgatttacgtaataaaaatatcactggaaaagaagccgaa
gaagctttaggtaaagcagatatcacggtaaataaaaatatggttccgtttgacactcgt
tctccttttgttaccagtggtattcgtataggggtttcggcaatcaccacacgtggttta
aagcagcaagatatgttacaaatcgctgaatttattgatagtgccattgtcaaccatcaa
gatgacgagactttagaggctatcgctgaaaaagttaatgaatttatggaaaatcgtccg
ctttttgcgtactaa
DBGET
integrated database retrieval system