Capnocytophaga canimorsus: Ccan_13780
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Entry
Ccan_13780 CDS
T01582
Name
(GenBank) (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
ccm
Capnocytophaga canimorsus
Pathway
ccm00061
Fatty acid biosynthesis
ccm00540
Lipopolysaccharide biosynthesis
ccm01100
Metabolic pathways
ccm01212
Fatty acid metabolism
Module
ccm_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
ccm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Ccan_13780
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Ccan_13780
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ccm01005
]
Ccan_13780
01004 Lipid biosynthesis proteins [BR:
ccm01004
]
Ccan_13780
Enzymes [BR:
ccm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
Ccan_13780
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
Ccan_13780
Lipopolysaccharide biosynthesis proteins [BR:
ccm01005
]
Lipid A
Ccan_13780
Lipid biosynthesis proteins [BR:
ccm01004
]
Fatty acid synthase
Component type
Ccan_13780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
ApeI-like
DUF2118
HP0268
DUF3600
Motif
Other DBs
NCBI-ProteinID:
AEK23494
UniProt:
F9YQ75
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All DBs
Position
1472462..1473850
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AA seq
462 aa
AA seq
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MVKQNTLAKEISLEGVGLHTGQHVKMTLKPAPIGNGYTFVRVDLEGAPVIEADANYVVNT
QRGTVLEKKGVKIQTCEHVLASLVGMNLDNVIIELNASEPPIMDGSAKYFVEAIAQAGLQ
EQDAPREEYIVKEVISYVNEETGSEITIIPAEEYQVTTMVDFGTKVLGTQNAYLNKLSEF
KDEIANSRTFSFLHELEMLIDHGLIKGGDLNNAIVYVDKELSQETMQKLKKVFNKEEISV
KANGILDNLELHYPNEAARHKLLDVIGDLALVGTRIRGKVIATKPGHFTNTQFAKKLSKI
IKNERRNNVPLIDINQQPLYDTVEIMRLLPHRPPFLLVDKIFELSDKHVVGLKNVTMNEP
FFEGHFPGAPVMPGVLQIEAMAQTGGILILSTVPDPENYLTYFMKIDNVKFKVQVKPGDT
LIFKLELITPIRRGICHMQAYAYVNGKLATEAELMAQIVKVK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaacaaaacactttagctaaggaaatcagtttagaaggcgtggggcttcataca
gggcagcacgtaaagatgactttaaaacctgcccccattggtaacggatatacttttgtc
agagttgacttggaaggagcaccagttattgaagcagatgctaactatgtggtaaacacc
caacgaggcacagtacttgaaaagaaaggagtgaaaatacaaacttgtgagcacgtattg
gcatcgctggtgggaatgaatctggacaacgttatcattgaactgaacgcttccgagcct
ccaattatggacggttcagcaaagtactttgtagaagccatcgcacaagccggattgcaa
gaacaagacgcaccacgtgaggaatatatcgtcaaagaggtaatctcatacgtcaatgaa
gaaacaggaagcgaaatcacaatcattccagctgaagaataccaagtaactactatggtt
gatttcggaacgaaagtgttgggtactcaaaacgcatacttaaataaattatccgaattc
aaagacgaaattgccaactcgcgtacctttagttttttacacgaactcgaaatgcttatt
gaccacggtttaattaaaggtggtgatttgaacaatgctatcgtttatgtagataaagaa
ctctcgcaagagactatgcaaaagctcaaaaaagtattcaataaagaagaaatttcagtt
aaggcaaacggaattttagacaatttggagctacactaccctaacgaagctgcccgtcat
aagcttttggatgtaattggtgatttggcacttgtgggtactcgcatccgtgggaaggtc
attgctaccaagcctgggcattttaccaatacgcagtttgctaaaaaactttcgaaaatc
atcaaaaacgaacgccgaaataacgttccgctcattgatatcaatcaacaaccgttgtac
gataccgttgaaattatgcggttgttacctcaccgtccgccgtttttgttagtagacaaa
atcttcgaactttccgacaagcacgtagtgggcttgaagaatgttacgatgaatgagcct
ttcttcgaagggcacttcccaggagctcccgtaatgcctggtgtacttcaaatcgaagct
atggcgcaaaccggaggtatccttattttgagtacagttcctgaccccgagaattacttg
acctattttatgaagatagataacgttaagtttaaagtacaggtaaaacctggtgatact
cttatctttaagttggaactcattacccctatccgtcgtggaatttgccatatgcaagcg
tatgcttacgttaacggaaagctggcaaccgaagccgaactgatggcacaaattgtaaaa
gtaaaataa
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