Capnocytophaga canimorsus: Ccan_14830
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Entry
Ccan_14830 CDS
T01582
Name
(GenBank) tRNA 3 endonuclease
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ccm
Capnocytophaga canimorsus
Brite
KEGG Orthology (KO) [BR:
ccm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccm03016
]
Ccan_14830
Enzymes [BR:
ccm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Ccan_14830
Transfer RNA biogenesis [BR:
ccm03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Ccan_14830
Prokaryotic type
Ccan_14830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Fn3_nematode
Motif
Other DBs
NCBI-ProteinID:
AEK23599
UniProt:
F9YQY9
LinkDB
All DBs
Position
complement(1602647..1603555)
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AA seq
302 aa
AA seq
DB search
MEITILGCHSATPRANARPSSQVLEMRGHLFLIDCGEGSQMALRNANVKFSRIKHIFISH
LHGDHFFGLPGLISTFQLLGRETELHIYGPKGIKEAILLLLKLGGAWSSFYIHFHELESE
VSEILLDDEKVQVRTIPLKHRVYTNGFLFQEKQTERRLNIDAIQNYGIQICDYQNIKNGK
DIESENGEVIPNELLSFDPILPQSYAYCSDTLYFETLADAIQGVRVIYHESTFLKQHNDL
ATKTMHSTAFQAGLTAKKANAETLILGHYSSRYSDKKLFLNEAQEIFPNVHLSEDGRKFV
FS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcactattttaggttgtcatagtgctacgcctcgggcaaatgctcgtccgtct
tcgcaagttttggaaatgcgagggcatttgtttttgattgattgcggggaaggttcgcaa
atggcactgcgtaatgctaatgttaagttttcacgcatcaaacatatatttatttcgcac
ctgcacggcgaccatttttttggcttaccagggctgatttccacctttcaacttttggga
agagaaaccgaattacacatttacggaccaaaaggcatcaaggaagcgatattacttctg
ctgaaattaggcggagcttggtcgtctttttacatacatttccacgaattggaatcagag
gtttctgaaatattgcttgatgatgaaaaagtacaggtgcggactatccctttgaaacat
cgtgtttacactaacggatttctatttcaggaaaaacaaaccgaacgtcgattgaatata
gatgctattcaaaattacgggatacaaatttgtgattatcagaatataaaaaacggaaaa
gatattgagtcagaaaatggagaggtaattccaaatgagcttttaagttttgacccgatt
cttccgcaaagttatgcctattgtagcgatacgctatattttgaaacattagctgatgcg
attcagggggtgcgggtgatttatcacgaatctacatttctaaaacaacataatgatttg
gcaaccaaaacgatgcattccacagcctttcaagcgggattgactgccaaaaaagccaac
gcggaaacgcttattttgggacattattcgtcgagatattctgataaaaaattgttttta
aatgaagcacaagaaattttccctaatgttcatttaagcgaagacggaaggaaatttgtt
ttttcataa
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