Capnocytophaga canimorsus: Ccan_16090
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Entry
Ccan_16090 CDS
T01582
Name
(GenBank) Conserved putative DNA-directed DNA polymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ccm
Capnocytophaga canimorsus
Pathway
ccm03030
DNA replication
ccm03430
Mismatch repair
ccm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ccan_16090
03430 Mismatch repair
Ccan_16090
03440 Homologous recombination
Ccan_16090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccm03032
]
Ccan_16090
03400 DNA repair and recombination proteins [BR:
ccm03400
]
Ccan_16090
Enzymes [BR:
ccm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ccan_16090
DNA replication proteins [BR:
ccm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ccan_16090
DNA repair and recombination proteins [BR:
ccm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ccan_16090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
DNA_pol_B_exo1
TRCF
TMEM95
T4_Spackle
Motif
Other DBs
NCBI-ProteinID:
AEK23725
UniProt:
F9YRJ5
LinkDB
All DBs
Position
complement(1740555..1741322)
Genome browser
AA seq
255 aa
AA seq
DB search
MELKLSKPICFFDLETTGTDITKDRIVEISILKVYPNGNKESKTWLVNPTIPIPKGASDV
HGITNERVANEPTFKELAKTIHNMIKDSDLAGYNSDRFDIPLLAEEMLRADVDFDLGNRV
TVDVQTIFHKMEQRTLSAAYKFYCGKTLDNAHSAAADTNATYEILKSQLDRYGELENDMK
KLSEFTTRKQAVDFAGFIALNEKNETIFTFGKHKGRKVEEILEEEPGYFGWILNADFPLY
TKKVLTAIKLKGFSK
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggaactaaaactatcaaaaccgatttgtttcttcgatttggaaaccactggaactgac
attactaaagaccgcattgttgaaatctctatactaaaagtatatcccaatgggaataaa
gaaagtaaaacgtggttggtaaatcctacaattccgatacccaaaggagcaagtgatgta
cacggaattaccaacgaacgcgtagccaacgaacccactttcaaggaacttgccaaaacc
attcataatatgattaaagattcggacttggcgggttacaattccgaccgcttcgatatt
cctcttttggcggaagaaatgctccgtgccgacgtcgattttgatttaggaaaccgcgta
acggtagatgtacaaaccatcttccacaaaatggaacaacgcaccctgagtgccgcttat
aagttctactgcggaaaaacgctggacaatgcacactcggcagcagcggacactaatgcc
acctatgagatactaaaatcacaactcgaccgatacggcgaactcgaaaacgatatgaaa
aaactcagcgagttcaccactcgaaaacaagcggtggactttgccggatttattgccctg
aacgaaaaaaacgaaaccattttcaccttcggaaagcacaaaggcagaaaagtggaagaa
atactggaagaagaacctggttacttcggctggattttaaatgctgactttccgctgtac
accaaaaaggtactaactgccatcaaactaaaaggattttcaaaataa
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