Capnocytophaga canimorsus: Ccan_16480
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Entry
Ccan_16480 CDS
T01582
Name
(GenBank) Lipopolysaccharide export system permease protein lptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
ccm
Capnocytophaga canimorsus
Pathway
ccm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ccan_16480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccm02000
]
Ccan_16480
Transporters [BR:
ccm02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
Ccan_16480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
DPM3
Motif
Other DBs
NCBI-ProteinID:
AEK23764
UniProt:
F9YRW3
LinkDB
All DBs
Position
complement(1778150..1779658)
Genome browser
AA seq
502 aa
AA seq
DB search
MRILDRYILTQFFKNFFGALFILILIFIFHTIWLFIDELAGRGLELWIIGKFILYYIPQL
IPIILPLTVVLSSIMTFGAFAENYEFAAMKASGVSLLRAMRPLILFMLFLSGFTFFLANN
VIPVAHAEVSNLRRNIARVKPAMAIAEGVFSDIGDELSIRVAKKSGKNDEFLEDVIIHKK
SPDKVNRTVINAQRGELKNDKDTDFLQLILYDGTYYEDIYTTNYRQQQKYPFAKVKFDRY
VMNMDLSHLNKVDFNEKSGINTYKMMTVGQLSYTVDSLKTYFKDNLTDYGNSQYRRTGVL
GLDFATKPDLPLDDENIKPEDQNKVEKTQEITPKLTLDSIFAKIDPSRKLQVYETALMQH
KNFVESTTYKTDDINYHNKMINLHLLTLSDKYALTMACLVLFFVAAPLGAFIRKGGIGLP
LVASMVLFLSYYFIGLFSKNVSENGTINPLFAPWIPTLILLPLGIYLTTRVTTDKGLFQF
ERIKDFFQQITQKKQRKKSASR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
ttgagaattttagaccgatatattctgacccaattcttcaagaatttttttggagcattg
tttatacttattctgatatttatatttcataccatttggctttttattgatgaattggca
ggtagagggttggaattgtggattatcggaaaattcattctttactacattccgcagtta
atccccattattttaccccttacggtggtgctttcttccattatgactttcggagctttt
gcggaaaattatgaatttgcagcaatgaaagcctctggagtgtctttgcttcgagcaatg
cgtccgttaattttatttatgctctttcttagcggatttacatttttcttagccaataat
gtgattcctgtagcccacgccgaagtttctaatctacgccgaaatattgcccgagtaaag
cctgcaatggctattgccgaaggtgttttttcagatattggtgatgaattaagtataaga
gtagcaaagaaatcgggtaaaaatgacgaatttctggaagatgttatcattcataaaaaa
tcacccgacaaggtaaatcgtacggttatcaatgctcaacgaggcgaactcaaaaacgat
aaagataccgattttttacagctaatactctatgatggaacgtattacgaagatatatat
accactaattacagacagcagcaaaaatatcctttcgctaaggtaaaatttgaccgttat
gtgatgaatatggatttgtcgcacctcaataaagtcgattttaatgaaaaaagtggtatc
aatacctataaaatgatgacggtggggcaattaagctacacggtggattcgttgaaaacg
tatttcaaggataatcttactgactatggaaatagtcaataccgcagaacaggtgtttta
gggttggattttgctaccaagcccgatttgccacttgatgatgaaaacatcaagcctgaa
gaccaaaacaaagttgaaaaaactcaagaaataaccccaaagctcaccttggatagtata
tttgctaaaatcgaccctagcagaaagctacaagtgtacgaaacagctctgatgcaacac
aaaaactttgtagaaagtaccacttataaaacggatgatatcaattaccataacaaaatg
ataaatcttcatttgttaaccctgagtgataaatatgcactaactatggcgtgtttggta
ttgttttttgtggccgcaccgcttggggcttttattcgaaaaggagggatagggttgcca
ctggtagcatcaatggtgctgtttttgtcttactactttattgggcttttttccaaaaat
gtatcagaaaacggaactataaatcccttgtttgccccttggatacctacgctgattttg
ttgcctttagggatatatcttaccactcgagtaactaccgataaagggctttttcagttt
gaacgtattaaggatttttttcagcaaatcactcaaaaaaagcaaagaaaaaagtcggct
tctcgttaa
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