Capnocytophaga canimorsus: Ccan_16980
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Entry
Ccan_16980 CDS
T01582
Name
(GenBank) tRNA pseudouridylate synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccm
Capnocytophaga canimorsus
Brite
KEGG Orthology (KO) [BR:
ccm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccm03016
]
Ccan_16980
Enzymes [BR:
ccm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Ccan_16980
Transfer RNA biogenesis [BR:
ccm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Ccan_16980
Prokaryotic type
Ccan_16980
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AEK23814
UniProt:
F9YS13
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All DBs
Position
1834682..1835434
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AA seq
250 aa
AA seq
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MTEHFLTPEQLLEGQILLIDKPLHWSSFQAVNKIKWSIIKNYKLKKIKIGHAGTLDPLAS
GLLVICTGKFTKKITEFQDALKTYTGTIRLGATTSSFDLETEIEQTFPIAHITPELIEQV
RQQFVGEIEQTPPVFSAIKREGKRLYELAREGEETIEVPKRIVQIQQFNIDISQFPDIDF
EVVCSKGTYIRSLANDLGKALQSGAHLIALRRTRIGDFLVENALSPDEFIQKYIPKRETN
EKNKKVLQSD
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacattttttaacccctgagcaacttcttgaaggtcaaattttactgattgac
aagcctttgcattggtcttcatttcaggcggttaataaaattaaatggtctattataaaa
aactacaaactaaaaaaaattaaaataggacacgctggaactttagatcctctcgcttcg
ggtttgcttgtcatttgcacgggaaaattcaccaaaaaaattaccgaatttcaagatgct
ctaaaaacctacacaggaaccatccgattgggggcaaccacttcgtcattcgatttggaa
acagaaatagagcaaacctttcctatagcacacattactcccgaattgattgagcaagtc
cgtcagcaatttgtaggagaaatagaacaaactccgcccgtattttctgctataaaaaga
gaaggaaaaaggctttacgaattggctcgtgaaggagaggaaaccatagaagttcctaag
cgaatcgttcaaatacagcaatttaatattgatattagccaattccctgatattgatttt
gaggtagtttgcagtaagggaacttacattcgttctttagcgaatgatttaggaaaagcc
ttgcaaagtggtgctcatttgattgctttgaggcgtacaagaattggtgattttttggtt
gaaaatgccctttctcctgatgaatttatacaaaaatacattcctaaaagagaaacaaat
gagaaaaacaaaaaggtacttcaaagcgattaa
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