Capnocytophaga canimorsus: Ccan_17220
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Entry
Ccan_17220 CDS
T01582
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ccm
Capnocytophaga canimorsus
Pathway
ccm03030
DNA replication
ccm03410
Base excision repair
ccm03420
Nucleotide excision repair
ccm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ccan_17220
03410 Base excision repair
Ccan_17220
03420 Nucleotide excision repair
Ccan_17220
03440 Homologous recombination
Ccan_17220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccm03032
]
Ccan_17220
03400 DNA repair and recombination proteins [BR:
ccm03400
]
Ccan_17220
Enzymes [BR:
ccm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ccan_17220
DNA replication proteins [BR:
ccm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Ccan_17220
DNA repair and recombination proteins [BR:
ccm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Ccan_17220
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ccan_17220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
AEK23838
UniProt:
F9YSB3
LinkDB
All DBs
Position
complement(1862483..1865239)
Genome browser
AA seq
918 aa
AA seq
DB search
MQKKRLFLLDAYALIFRGYYAFIKNPRINSKGLNTSAILGFMNSLLEVIKKERPDHLAVA
FDKGGSVERTEMFQAYKAHREETPEAIRLAIPYIWEILQALHIPILVKEGFEADDIIGTL
AKKAEKQGYLVYMVTPDKDFAQLVSENIFMYRPSRSGNDAEIWGVPEVQEKFGVQTPEQV
IDFLGMMGDTADNIPGLPGVGEKTAKKLLADFGSLENLLSNTHKLKGKLRENIENNAELG
ILSKKLARIILDVPVEFNERDFEISNPDMEQVTKIFEDLEFRQLLQNLIKTYQNATEQTQ
AIQTDLFGGESLSERKNIQNTPHFYQLVDTPIALKILLQNLLTQSEVCFDTETTDLDSLQ
AELVGIAFSWHQGKGYYLPLPENPAQTQEILQDFKIFFENEQITKVGQNLKYDIKVLANY
GIEVKGNLFDTMVAHYLINPDMRHNMDVLSQTYLNYSPIPIENLIGKKGSGQLSMRWVAL
EDQKEYAVEDADITWQLKDLFREKLQQTHTASLYTDLEAPLIRVLAKMELEGIALNTDFL
KTLSVTLDEDISTLENAIFALAGETFNLASPKQLGDILFEKLKIADKPKKTKTGQYATSE
AILSDFAEHHPIVAQILEWRQLQKLKSTYVDALPLEVNPKTGRVHTTYMQTVAATGRLSS
NNPNLQNIPIRTPRGQQIRKAFVARDKNHVLLAADYSQIELRIIASLSQEPNMIKAFNQG
EDIHRATASQVFGVPIDEVTREQRSHAKTVNFGIIYGVSAFGLSNQTELSRSESKQLIDT
YYATYPNLRGYINKQIAFAQEHGYVETILGRRRYLPDIHSKNQVVRSAAERNAVNAPIQG
SAADIIKIAMIRIQNRLEKENFQTKMLLQVHDELVFDVPKSELEAVKKAIQSEMENAYSL
TVPLVVDLGEGDNWLEAH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaaacgactttttttattagatgcctacgctttgattttcagaggatattat
gcttttatcaaaaatccgagaattaattcaaaagggctaaatacctctgccattctcgga
tttatgaattcgttattggaggttatcaaaaaagaacgccccgatcatttggctgtagca
ttcgataaaggaggcagtgttgagcgtaccgaaatgtttcaggcatacaaagctcatcgg
gaagaaacccccgaagctattcgccttgccattccgtatatttgggaaattttacaagcc
ttgcacattcctattttggtaaaggaaggatttgaggcggatgatattatcggaactttg
gcaaaaaaagccgaaaaacaaggttatttggtatatatggttactccagataaagatttc
gctcaattggtatccgaaaatatttttatgtatcgtccttcacgttcgggaaatgatgca
gaaatttggggagtgcccgaagtccaagaaaagtttggagtgcaaacccctgagcaggtt
attgattttttaggaatgatgggcgatactgccgacaatattcctggacttccgggggtc
ggagaaaaaacagcaaaaaagcttttggcagatttcggaagtttggaaaacctgctgtct
aatactcataaactcaaaggtaaacttcgtgagaatattgaaaacaatgctgaattaggc
atactttctaaaaaattggcacgtattattttagatgttcctgtggaatttaatgagcgt
gattttgagatctcaaaccccgatatggagcaggtaaccaaaatttttgaggacttggag
tttagacaattgcttcaaaatctgattaaaacctatcaaaatgctacagagcaaacccaa
gccattcagacggatttatttggaggcgaatctttatcggagcgcaaaaacattcaaaac
acgccccatttttatcagttggtagatactcccatagctctaaaaatattattgcagaac
ttgttaacccaatctgaagtttgtttcgataccgaaaccaccgatttggatagcctacaa
gccgaactagtcggcattgctttttcgtggcatcaagggaaggggtattatttgcctctg
cctgaaaatcctgcccaaactcaagaaatattacaagattttaaaatcttctttgaaaat
gagcagattaccaaagtggggcaaaatttgaaatacgatatcaaggtacttgccaattac
ggcattgaagtaaaaggcaatttgtttgacacaatggtagctcattatttaatcaatcca
gatatgcgccataatatggatgtgctttcccaaacctatttgaattattcgcccattcct
attgaaaatcttatcggtaagaaaggaagtgggcagctgtctatgcgttgggtggcgctg
gaagaccaaaaagaatatgctgtggaagatgccgatatcacttggcaactcaaagacctt
ttccgagaaaaactacaacaaacccataccgctagtttgtatactgatttggaagcgcct
cttatacgagtattggctaagatggaattggaaggtatcgctctgaataccgatttttta
aaaacactttccgttactttagatgaagacatctctacattagaaaacgctatttttgcc
ttagctggagaaacattcaatttggcttccccaaaacaattgggcgatatcttgtttgaa
aagcttaaaattgcggataaacctaaaaagacaaaaacggggcaatatgctacctctgag
gcaatactctccgattttgctgagcatcaccctattgttgctcaaattctggaatggcgt
cagctacagaaacttaaaagtacttatgtagatgcacttcctttggaggtaaaccctaaa
acaggtcgggtacataccacttatatgcagacggttgctgccactggaaggctcagtagc
aataaccccaacttacaaaatatccctattcgtaccccacgagggcaacaaatacgtaaa
gcctttgtagcacgagataaaaatcacgtattattagccgccgactactcacaaattgaa
ttgcgtatcattgcctcacttagccaagagcccaatatgataaaggcatttaatcaagga
gaagacattcaccgtgctacggcttctcaagtgtttggcgttcccattgatgaggtaacc
cgtgagcaacgtagccacgccaaaacggtcaactttggtatcatttatggcgtatctgcc
tttgggttaagtaatcaaaccgaactttctcgctcagagagtaaacaactgatagatacc
tattatgcgacctatcctaaccttagggggtatataaacaaacaaattgcctttgcacaa
gaacacggctatgtagaaaccattttaggtagaagacgttatctgcctgatattcattcg
aaaaaccaagtggttcgcagtgctgccgagcgtaatgcggttaacgcacccattcaaggt
agtgccgccgatattattaaaattgcaatgattcggattcaaaatcgattagaaaaagaa
aatttccaaaccaaaatgttattgcaagtacacgacgagttggtgttcgatgtgccaaaa
tcagaacttgaagccgtaaagaaagcaatccaatccgaaatggaaaatgcctactcactt
actgttccattggtagttgatttgggagaaggagacaattggcttgaagcacattaa
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