Capnocytophaga canimorsus: Ccan_22650
Help
Entry
Ccan_22650 CDS
T01582
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ccm
Capnocytophaga canimorsus
Brite
KEGG Orthology (KO) [BR:
ccm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccm03400
]
Ccan_22650
DNA repair and recombination proteins [BR:
ccm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ccan_22650
Archaeal homologous recombinant proteins
Ccan_22650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
FtsK_SpoIIIE
ABC_tran
AAA_21
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEK24380
UniProt:
F9YVE6
LinkDB
All DBs
Position
2437361..2441083
Genome browser
AA seq
1240 aa
AA seq
DB search
MKILSVNLYNIASIEGPFHIDFESEPLKSEGLFAITGATGSGKSTILDAICLALYNNTPR
LSPIKSYINIGDGENNLSVRDVKTLLRKGAEAAFAKVVFKAIDDKIYASEWKIRRARGYG
KIQDEVITLENLSDKTLFPERNKTLVLKEIQRLLGLSFEQFTKSVILAQGEFANFLKATE
SDRADILEKLTGTEIYSKVSAQIFQKHKDLQTEITFFDAQLSSIELLTDEEQQALHSALN
QLKEQENQLVTAQIQLQIQLDWHLKNQQLTEQIHQASANLQIAQEAKNQQQHRFETLDKV
EKIQPLKPIWLQKENVQKQIFTVELDIEGFSQKITELQQQATVIQNALDKEKQHQQTLLQ
LHEKWLPQIQQARVLDIQIQQKKEILSDKIQQIQAFEQNNQALIGKIEVEKQTLAQIQER
INQNKLWQSQNAYFEKFAENYSLIGVSCKEAERAISEKEKFRKEVEDLKGQIHQVEVFVN
EEKIKNENLVQQHILAKQAYDEFKKAIKGFDIEKLISEQNEIIQKIEQQKNILNSIQKLQ
EERQNVQRTQQKKQRKKEQLIQIEQQLAQNQADVSLAQQEVSVLEKLLQKLQLESSENVE
NLRRGLIPDAPCPVCGATHHPYQEQRYENRALQELERQLEEAQENHFRLQNQAHDLLSNK
KITEAEIQNLTQKEEESIVIQHQERKKISFLENDFIAKEHNLETLEKNIKVVLSDYQNNV
AVIVDKIADYQGLKARETTLETRFNQALNQLESSNRKLNDLENASQKLVHRFDSAQRLLE
SAQNMLTEKEQSVNQLLDNPSSFLLWKNTPEQFANRLTKAVNDWQQSQENLRLAEQSQLS
VNQNILHLSQQQLDQAKQLEDLKTLYDREAQLLSEMELERQNLLGEKNADQVERQINDKL
KIVQKQIELQLTNYQKNAIDFQEISAKKQTQEQFLAQLKQERETLQGRIEHWMIENPDFK
ADLNTQKFDYWISLDNLWIHQERLQLKQLEEGCLMAQTLLKDRSDSLKRHQNQNIPEQSQ
SDCERLLAENKESEAKVRQDIGKLHNQWAVHQKEVEKHQDLLRQREEKQQVLSQWEVINS
LIGSSSGKVFQRYAQEFTLDTLLRYANVHLSSINQRYQLERISDTLSLQVIDKEMGYEVR
SVYSLSGGESFLVSLGLALALSSLSSTKMNIETLFIDEGFGTLDAKTLAIAMDALESLQH
QGKKVGVISHVQEMTERIAVKIEVKKQGNGKSSIQIKNDW
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattatcggtaaatttgtataatatcgcttcaattgaggggccttttcatatt
gattttgaaagcgaacctttaaaatcggaaggattatttgctataacgggagctacaggc
tcggggaaatctacgattttagatgctatttgtttggctttatataacaatacccctcgt
ctttcacccatcaaaagttacataaacattggtgatggcgagaataatctttccgttcgc
gatgtgaaaacgcttttgcgtaaaggagcagaagccgcttttgcaaaggtggtttttaaa
gcaattgacgataaaatttatgccagtgaatggaaaatacgtagggctcgtggctatggc
aaaatacaagatgaggtaatcactttggaaaatctttcagacaaaacgctttttccagaa
cgaaataaaacacttgtgcttaaagaaatacagcgtttgttagggctttcttttgagcaa
tttaccaaatcggtgattttggcacagggcgaatttgctaattttcttaaagctaccgaa
agtgaccgagcagatattttggaaaaacttacaggtacggaaatttattcgaaagtttcg
gctcaaatttttcaaaaacataaagatttacaaacagaaattactttttttgacgcacaa
ctctcatcaattgaactacttaccgatgaagaacaacaagcgttgcactcagcgttaaat
cagctaaaagaacaagaaaaccaacttgttacggctcaaatacaattacaaatacagctg
gattggcacttgaaaaaccagcaacttaccgagcaaatccatcaggcttcggcaaatttg
caaatcgcacaagaggctaaaaatcaacagcaacatcggtttgaaacactggataaggta
gagaaaatacagcctttaaaaccgatttggcttcaaaaagaaaatgttcaaaaacaaatt
tttacggtggagcttgatattgaggggttttcgcaaaaaataaccgagcttcaacaacaa
gccactgtgatacaaaacgctcttgataaggaaaaacaacatcagcaaacccttctgcaa
ttgcacgaaaagtggttgccacaaattcaacaagctcgagtattagacattcaaattcag
caaaaaaaggaaatactttccgacaaaatacaacaaattcaagcttttgaacaaaataat
caggcgcttatcggtaaaatagaggtagaaaagcaaacgttagcccaaattcaagagcgt
atcaatcaaaataagttatggcaaagtcaaaatgcttattttgaaaaatttgcagaaaat
tattcgcttattggggtaagttgtaaagaagctgaaagagctatttctgaaaaggaaaag
ttccgaaaagaagtggaagatttaaaagggcagatacatcaggtggaagtttttgtaaat
gaggagaaaatcaaaaatgaaaacttggtacagcaacacatcttggcaaaacaagcatac
gacgagtttaaaaaagccattaaggggtttgatattgaaaaactcatatcggagcaaaat
gaaattattcagaaaattgaacaacaaaaaaacattttaaattcgatacaaaaattacaa
gaggagcggcaaaacgtacaacgcactcaacagaaaaaacaacgaaaaaaggaacaactt
attcaaattgagcagcaattagcacaaaatcaagcagatgttagccttgcccaacaagaa
gtaagcgttttagaaaaattgttgcagaagttacaattggaaagctcagaaaatgttgaa
aatctccgtcgtggactgattccagatgccccttgcccagtttgtggtgctactcatcat
ccgtatcaggagcaaagatatgagaatagggcgctacaagaattggaaagacaacttgaa
gaggcacaagaaaatcattttcgtttgcaaaatcaagcacacgatttgctttccaataaa
aaaataacagaagccgaaattcagaatttgacccaaaaggaagaagaaagcatcgttata
caacatcaagaaagaaaaaagatatcatttttagaaaatgattttattgcaaaagagcat
aaccttgaaactttagaaaaaaatatcaaagtggttttgtccgactaccaaaataatgta
gcagttatagttgataaaattgcagattatcaaggattaaaagccagagaaaccacctta
gaaactcgctttaatcaagccttaaatcagctcgaaagctcaaatcggaaattaaacgat
ttagagaatgcttctcaaaaacttgttcatcggtttgattcagcccaacgattgcttgaa
tctgcacaaaatatgcttaccgaaaaagaacaatcagtaaaccagctacttgataatcca
tcgtcgtttttactatggaaaaatacccctgaacagtttgcaaatcgcctaacaaaagcg
gttaacgattggcaacaaagccaagaaaatttacgtttggcagagcaatcgcaactttcg
gtcaatcagaatattttacatctttcacagcaacagctcgaccaagctaagcagttggaa
gatttaaaaacgctatatgatagggaagcgcaattgttatcggaaatggaattggaacgc
caaaatcttttaggagagaaaaatgctgaccaagtagagcgacaaatcaatgataagttg
aaaatagttcaaaaacaaatagagttgcagctgaccaattatcagaaaaatgcaattgat
tttcaagagatttcggcaaaaaaacaaacccaagagcagtttctcgcccaattaaagcaa
gagcgagaaactttacaagggagaattgagcattggatgatagaaaacccagatttcaaa
gcggatttaaacactcaaaagtttgattattggatttctttggataatctttggatacat
caagagcgtttgcaattaaaacaactcgaagaagggtgtctgatggcacaaaccttactt
aaagatcgtagtgatagtctgaaacggcatcaaaatcaaaatattcctgaacaatctcaa
tcagattgtgaaaggttacttgctgaaaacaaggagagtgaggctaaggttaggcaagac
atcggaaagctacacaatcaatgggctgtgcaccaaaaggaagtagagaaacatcaggat
ttactgcgacaaagagaggagaaacagcaagttttatcccaatgggaagtcataaacagc
cttattggcagcagcagtggtaaagtttttcaaaggtatgcacaagaatttacactggac
actttactgcgttatgccaatgtacatttgagtagtattaaccaacgataccagctggag
cgcatctccgatacgctcagtttgcaggtgatagataaggaaatggggtatgaggtacgt
tcggtatattcgctttcgggaggggagtcgtttttggtgtctttggggcttgccttggca
ctttcctcgctttcttctaccaaaatgaatatcgaaaccttgtttattgatgaaggcttc
ggtaccttagatgcaaaaacactcgccatagctatggatgcccttgaaagtttacaacat
cagggtaaaaaagtaggagtgatttctcacgtacaagaaatgaccgaacgtattgctgta
aaaatagaagttaaaaagcaaggcaatggtaaaagtagcatacaaatcaaaaatgattgg
tga
DBGET
integrated database retrieval system
