Corynebacterium callunae: H924_02370
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Entry
H924_02370 CDS
T02507
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ccn
Corynebacterium callunae
Pathway
ccn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H924_02370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccn03021
]
H924_02370
03400 DNA repair and recombination proteins [BR:
ccn03400
]
H924_02370
Enzymes [BR:
ccn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H924_02370
Transcription machinery [BR:
ccn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H924_02370
DNA repair and recombination proteins [BR:
ccn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H924_02370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AGG65928
UniProt:
M1UXH7
LinkDB
All DBs
Position
516064..520065
Genome browser
AA seq
1333 aa
AA seq
DB search
MLDVNVFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLDLIIYFGANIITSVDEEARHSDQTTLEAEMLLEKKDVEADAESDIAERAEKLEED
LAELEAAGAKAEARRKVQAAADKEMQHIRERAQREIDRLDEVWQTFIKLAPKQMIRDEKL
YDELIDRYEDYFTGGMGAESIEALIRNFDLDAEAEELRDIINNGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLNAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIEL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLRLHECGLPKLMALELFKPFVMKRLVENEYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYYLTLLKNADEFGGQ
GAYAPADENGPEKGVYSSLAEAIMAYDRGVLGLQAPVRIRLDHLRPPADVEAEQFPDGWN
QGETWLASTTLGRVLFNEILPWNYPYLEGVMVRKGGGTDKIMLGDVVNDLAAKYPMITVA
QTMDKMKDAGFHWATRSGVTIAMSDVLVLPNKEEMLDRYEESARQIEIKYGRGKLTSRER
YDRLVELWKDATDEVGQAVENLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKGD
YITRPIKTSFREGLTVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRVED
CGTRQGVRVPVAAEVLDATGAVTGYTRHDLIETSVSGRVLAGDATDANGEVVLTAGTDLT
ELNIDLLVEKGIKEVKVRSVLTCQTPTGVCAKCYGKSMASGHQVDIGEAVGIVAAQSIGE
PGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNCAPIASVEGTIHLEDEGNFYTLT
IIPDDGSDNVVYEKLSKRQGLASTRVAMESNAGAFIERTLTEGDRVTVGQRLLRGAADPH
DVLEILGRRGVEQHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPGS
LVDLSEAKLANSEAINAGGQPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAIN
KRSDKLIGLKENVIIGKLIPAGTGISRYRNISIKPTEAARNAAYSIPTYGESIYGDDGFG
EFTGASVPLDEAF
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtaaacgtcttcgatgagctccgcatcggcctggccactgctgacgacatt
cgtcgttggtctaagggcgaggttaagaagccggagaccatcaactaccgaaccctcaag
cctgagaaggacggtctgttctgcgagcgtatcttcggtcctacccgcgactgggagtgc
gcctgcggcaagtacaagcgcgtccgctacaagggcatcatctgtgagcgctgtggcgtt
gaggtcacaaagtccaaggttcgccgtgagcgcatgggccacattgagctcgccgctccg
gtaacccacatctggtacttcaagggtgttccttcacgccttggttacctgttggacctg
gctcctaaggatctcgacctcatcatctactttggtgcgaacatcatcaccagcgttgat
gaagaggctcgccacagcgaccagaccactctagaagcagaaatgctgctggagaagaag
gacgttgaggcagacgcagaatccgatatcgcagagcgtgcagaaaagctcgaagaggat
cttgctgaacttgaggctgctggcgctaaggctgaagcacgccgcaaggtacaggctgca
gccgataaggaaatgcagcacatccgtgagcgcgctcagcgcgagatcgatcgccttgat
gaggtctggcagaccttcatcaagcttgctccaaagcagatgatccgcgacgagaagctt
tacgatgagctcatcgaccgctacgaggattacttcaccggtggtatgggtgcagagtcc
atcgaggctcttatccgtaacttcgacctcgatgctgaggctgaagaactgcgcgacatc
atcaacaatggcaagggccagaagaagatgcgtgcgctgaagcgcttgaaggttgttgca
gccttccagcgttccggcaacgatccagccggcatggttctgaatgcgatcccagtgatc
ccaccagagctgcgcccaatggttcagctggacggtggtcgctttgcgacctccgacctt
aacgacctctaccgtcgtgtaatcaaccgcaacaaccgcctcaagcgcatgatcgaactc
ggtgctcccgagatcatcgtgaacaacgagaagcgcatgctgcaggaatctgtagacgca
ctcttcgacaatggtcgtcgtggtcgtccagtgaccggaccgggcaaccgtccattgaag
tcactgtctgacttgcttaagggtaagcagggacgtttccgtcagaacttgctgggtaag
cgtgttgactactccggtcgttccgttattatcgttggtcctcagctgcgcctccacgaa
tgtggtctgcctaagctgatggcacttgagctcttcaagcctttcgttatgaagcgcttg
gttgagaacgagtacgcacagaacatcaagtctgcaaagcgcatggttgagcgtcagcgt
cctgaggtttgggacgttctcgaagaagccatctctgagcacccagtgatgctaaaccgt
gcaccaaccctgcaccgccttggtatccaggctttcgagcctgtgcttgttgagggtaag
gctattcagctgcacccactggcctgtgaagcattcaacgctgacttcgacggtgaccag
atggcagttcacctgccactgtccgctgaggctcaggctgaagctcgcatcttgatgctt
gcttccaacaacattttgtccccagcatcaggtaagcctttggctatgcctcgtctggac
atggttaccggtctgtactacttgactctgctcaagaacgctgatgagttcggcggtcag
ggtgcttacgcacctgcagatgagaatggtccagaaaagggtgtctactcttccttggca
gaagccatcatggcttatgaccgtggagtactaggcctgcaggctccagtgcgtatccgc
ctggatcacttgcgcccaccagcagatgttgaagcagagcagttcccagacggttggaac
cagggtgaaacctggttggcatccaccaccttgggtcgtgtgctcttcaacgagatcctg
ccttggaactacccataccttgagggcgttatggtccgtaagggtggcggtaccgacaag
atcatgcttggcgacgtggttaatgacctcgcagctaagtacccaatgatcactgttgcg
cagaccatggacaagatgaaggacgctggtttccactgggctactcgctctggtgtcacc
atcgctatgtctgacgttttggttcttcctaacaaggaagaaatgctggaccgctacgag
gaatctgctcgccagatcgaaatcaagtacggccgcggaaagcttacttcccgcgagcgt
tacgatcgcctcgtagagctctggaaggacgcaaccgacgaggttggtcaggctgttgag
aatctgtacccagatgacaacccaattccaatgatcgtgaagtccggtgctgccggtaac
atgcgtcagatctggacccttgcaggtatgaagggaatggttgtgaactcaaagggtgac
tacatcacccgtcctatcaagacttccttccgtgaaggcttgacagttcttgagtacttc
aacaactcccacggttctcgtaagggccttgccgataccgcactgcgtaccgcggactcc
ggctacctgacccgtcgtcttgttgacgtcgcccaggatgtcatcgtccgcgttgaggat
tgtggtacccgtcagggtgttcgcgttcctgtcgctgctgaggttttggatgcaaccggt
gctgtcaccggctacacccgccatgacttgatcgagacttctgtgtccggtcgtgtgttg
gctggcgatgctaccgacgccaacggcgaagttgtgctcaccgcaggcaccgacctgact
gaactcaacatcgatctcttggttgaaaagggcatcaaggaagttaaggttcgttccgta
cttacctgccagactcctaccggtgtttgtgctaagtgctacggcaagtccatggcttcc
ggccaccaggttgacatcggagaggctgtcggcatcgttgctgcacagtccatcggtgaa
cctggtacccagctgaccatgcgtaccttccaccagggtggtgtcggtggcgatattacc
ggcggtctgcctcgtgttcaggagcttttcgaagcacgtgttccaaagaactgtgctcca
attgcttctgttgaaggaaccatccacctcgaggatgaaggcaacttctacaccttgacc
atcattcctgatgatggttcggacaatgttgtctatgagaagctgtccaagcgtcagggt
cttgcatccactcgcgtggctatggaatccaacgctggtgccttcattgagcgcaccttg
accgagggtgaccgtgtcaccgttggtcagcgtctgctccgtggtgcagctgatccacac
gacgtgctcgagatcctcggtcgccgtggtgtggagcagcacctcatcgatgaggtgcag
gctgtttaccgtgcacagggtgtggccatccacgataagcacatcgaaatcattattcgt
cagatgctgcgtcgcggtaccgtcattgagtccggttccaccgagttccttccaggttct
ttggttgacctttccgaggcaaagctggctaactctgaggcaatcaacgcaggcggccag
cctgcagagctgcgttctgagatcatgggtatcaccaaggcctctctcgcaactgagtct
tggctgtctgcagcgtccttccaggagaccactcgtgtcctgactgatgctgctatcaac
aagcgctccgataagctcatcggcctgaaggagaacgtgatcatcggtaagctgatccca
gctggtactggtatttcccgttaccgcaacatctccatcaagccaaccgaggctgctcgc
aacgccgcatactcgatcccaacttatggtgagtcgatttacggtgacgatggattcggt
gagttcaccggcgcatccgtcccattggatgaggctttctag
DBGET
integrated database retrieval system
