Corynebacterium callunae: H924_03925
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Entry
H924_03925 CDS
T02507
Name
(GenBank) hypothetical protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ccn
Corynebacterium callunae
Pathway
ccn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
H924_03925
09124 Replication and repair
03420 Nucleotide excision repair
H924_03925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccn03021
]
H924_03925
03400 DNA repair and recombination proteins [BR:
ccn03400
]
H924_03925
Enzymes [BR:
ccn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H924_03925
Transcription machinery [BR:
ccn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
H924_03925
DNA repair and recombination proteins [BR:
ccn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
H924_03925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGG66231
UniProt:
M1TPF6
LinkDB
All DBs
Position
complement(836763..838496)
Genome browser
AA seq
577 aa
AA seq
DB search
MAFGDGPLIVQSDKTVLLEIDHPQASAARAELAPFAELERAPEHIHTYRITPLALWNARA
AGHDAEQVVDMLERYSRFPVPQSLLIDIAETMSRYGRVSLHRHPAHGLILESAEPAILVE
ISRHKKIKPMLGQQVDPETIIVHPSERGRLKQELLKIGWPAEDLAGYVDGEAHPIALSTA
DEEWALRDYQEMAADSFWNGGSGVVVLPCGAGKTMVGAAAMARAQATTLILVTNTVAGRQ
WKDELLRRTTLTEEEIGEYSGERKEIRPVTIATYQVVTRRTKGEYKALELFDSRDWGLII
YDEVHLLPAPVFRMTSDLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDLEAQG
FIATADCVEIRSTMTDAERMVYATAESADRYRLAACAHTKVAVVQKVLEHHAGQPTLIIG
AYLDQLEELGQRFDAPVIDGKTPNKKREALFAQFRAGELDVLVVSKVANFSIDLPEASVA
IQVSGTFGSRQEEAQRLGRLLRPKHDGGEAHFYSIVSRDTLDTEYAAHRQRFLAEQGYAY
RIMDADDLLFPIIPAAVDPERVDPQPFDPDPITEKDI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtggcttttggcgatggaccactgattgttcaatcagataagactgtgctgctggagatc
gatcatccccaggccagcgcagcacgcgcggaactagctccttttgcagagctggaacgt
gccccggaacatattcacacctatcgcatcactcccctagcgctatggaatgcccgggct
gctggacacgatgccgagcaagtggtggatatgctggaacgctattcccgcttcccggtc
ccgcaatcgctgcttattgatattgcagaaacgatgtctcgttatggacgtgtcagtttg
caccgccatcccgcacatggactgattctagaatctgccgaacctgcgattttggtggaa
atctcacgccacaaaaagatcaagcccatgcttggccaacaggtggatcccgagaccatc
attgtgcatccctctgagcgaggtcgtctcaaacaagagctgctaaagattggctggcct
gcagaagatctggctggctatgttgatggcgaggcacaccccattgcgctatcgaccgcc
gatgaagaatgggcactgcgcgattatcaagaaatggctgccgattccttttggaacgga
ggttccggcgttgtcgttttgccctgtggcgctggcaagaccatggtgggagctgctgcc
atggctcgtgcccaggcaaccactctgattttggtgaccaatacggtggccggacggcag
tggaaggacgagctgctgcgccgcaccaccctcaccgaagaagaaatcggcgaatactcc
ggagagcgcaaagaaatccgcccggtgaccattgcgacctatcaggtggtcacccgacgt
accaagggcgagtacaaagctttggaactttttgattcccgcgactggggcctaattatc
tatgatgaggtccacctcctccccgcaccggtattccgtatgacctctgatcttcaatcc
cggcgtcgtctcggcctgaccgccactttagtgcgtgaagatggccgcgaaggtgatgtt
tttagcctcattggtccaaaacgatatgacgcaccttggaaagacctcgaagcccaaggt
tttattgccaccgctgattgtgtggaaatccgttctacgatgactgatgccgagcgcatg
gtttatgccactgctgagtcagcagatcgctaccgtctagcagcctgcgcccataccaag
gtggcagttgtgcaaaaggtacttgagcaccacgccggccagcccactttgattatcggt
gcttatttggatcagctggaggaacttggacaacgttttgatgccccagttattgacggc
aaaactcctaataagaagcgtgaagcactctttgcacaattccgggccggggaattagat
gtgctggtggtatcaaaggtggctaatttctccattgacctccccgaagcttcggtggcg
attcaagtctcaggtacctttggcagccgtcaggaggaagcacagcggctgggtcgctta
cttcgccccaaacacgatggtggcgaggcgcatttctactccattgttagccgcgatacc
ctcgatacggagtatgcagcccaccgccagcgcttcttagccgaacaaggttatgcctat
agaattatggatgctgatgatctgctcttcccgatcatccctgcagctgttgaccccgag
cgcgtcgatccacaacctttcgaccccgacccgattacagagaaagatatctaa
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