KEGG   Corynebacterium callunae: H924_04060
Entry
H924_04060        CDS       T02507                                 
Name
(GenBank) hypothetical protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ccn  Corynebacterium callunae
Brite
KEGG Orthology (KO) [BR:ccn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccn03400]
    H924_04060
Enzymes [BR:ccn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     H924_04060
    5.6.2.6  RNA 3'-5' helicase
     H924_04060
DNA repair and recombination proteins [BR:ccn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    H924_04060
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_3rd_Lhr DEAD WHD_4th_Lhr WHD_2nd_Lhr Helicase_C ResIII DUF6406 AAA_25 PhoH
Other DBs
NCBI-ProteinID: AGG66258
UniProt: M1UY05
LinkDB
Position
869960..874504
AA seq 1514 aa
MANSVLSRFRPQVAEWFRDVFAAPTPVQEGTWKAVSEGNNALVVAPTGSGKTLAAFLWAL
NSLTEQTGQTVLDTGTPVPVRGGKVKVLYISPLKALGVDVENNLRAPLNGIARTAAKMGL
DVPNITVAVRSGDTPAAERARQVRKAPDILITTPESAYLMLTSKAGAILSEVDVVIIDEI
HAMAGTKRGVHLALTLERLEMLTKRPVQRVGLSATVRPLETVASFLGGNRPVTIVAPPAE
KKWELTVTVPVEDMSDLPTQEQGSTIGEYVIDDPLGLTGESALPTQNSIWPHIEQQVYNQ
VMSAKSTIVFVNSRRSAERLTSRLNEIWALEHDPESLSPELRRPPAQVMGSDVAGKAPQV
IARAHHGSVSKDERALTETMLKEGRLKAVISTSSLELGIDMGAVELVIQVESPPSVASGL
QRVGRAGHFVGATSIGSFYPKHRSDLVQTAVTVQRMKEGLIEELKVPKNALDVLAQQTVA
AVSIADVNVDEWYEIVRKSYPYRELAREVYDSVIDLVSGVYPSTDFAELRPRVVFDRVSG
MLESRPGAQRVAVTSGGTIPDRGMFGVFLVGDGPRRVGELDEEMVYESRVGDVFTLGASS
WRIEEITRDQVIVTPAPGHTGRLPFWTGDAAGRPAELGKALGAFRRTTLADPASSGLEGW
AHDNLIAFLQEQEEATGVLPDEKTLVLERFRDELGDWRIVLHTPYGRGVNAAWALAIGAK
IAEATGMDAQAVSGDDGIVLRLPDGEEPSGALFMFDAEEIEKIVTEQVGNSALFASRFRE
CAARALLLPRRNPGKRAPLWQQRQRAAQLLDVARKYPSFPIILETVRECLQDVYDLPALK
QLIEDLQLRRVRIVEVTTQQPSPFASSLLFNYTGAFMYEGDSPLAEKRAAALALDPTLLA
KLLGEVELRQLLDPDIIQEVHDQLRRVSDRAARNNEELADSLRILGPIPLDELGEHITFD
DPDLGDRAMTVRINGRPHLAQVLDAPLLRDALGVPVPPRVPAQVETITDAMEQLVNRWVR
TRGPFVAQDLADAFGLGIAQAITYLRAAPVTEGHFRQGIAAQEYCATEVLGIIRRRSLAL
ARKQTRPVSQTAYARFLLDWQQVAPVGKRPTLRGVDGTYSVIEQLAGVRLPASAWEDLVL
PARVDYSPAHLDELTANGEVLIVGAGQAGSRDPWITLLPADFAEQLVGAASTSLTPLQEA
VVEQLKPGGGFLFSDILAANFGYTASQLQEAMWGLVEAGVVSPDSFAPIRARLASGGAHK
AKRRPTRSRVRTRTTFNTEVPPDMRGRWALTVQPADATSRSVAHGEAWLDRYGVVTRGSV
VAEDVVGGFALAYKVLSGFEESGKAIRGYLIEGLGAAQFSTPAIIDRLRGNDDSPDVEGW
PSGATDPEVYLIAAADPANPYGAALPWPESGNRAAGAMVVLCDGMLLAHISRGGRTLNVF
HDDIERIARALATYDRLTVEKINGESVFDSPLLAKFRSFGASITPKGMRFREVISFDDQL
PERGARPFRGGFGR
NT seq 4545 nt   +upstreamnt  +downstreamnt
atggctaatagcgttctttcccgattccgtccccaagtagcagagtggtttagggatgtt
tttgcagcgccaactccggttcaggaaggaacctggaaggcggtttcagagggaaataat
gcattagtggtagcaccaacaggtagtggtaaaaccctcgctgcttttttgtgggcactt
aattcgctcaccgaacaaacaggtcaaacggttctagataccggcacgccagttccagtc
cgcggtggcaaggtgaaagttctttatatttcaccgcttaaagcactaggtgtggacgtg
gaaaataacctgcgcgcaccccttaatggtattgctcgtacggctgcaaaaatgggcctt
gatgtgccgaatatcaccgtggcagtgcgctctggcgataccccggcagcggagcgtgca
cgccaggttcgcaaagctccagacatcctcattaccactcccgaatctgcctacctcatg
ctcacttccaaggccggagcaatcctctctgaggtggatgttgtcatcattgatgagatc
cacgccatggctggcactaaaaggggagtacacctcgcactgaccctggaacgcctggaa
atgctgaccaaacgcccggtgcaaagggtaggtctttcagctactgtgcgaccgctagaa
accgtagcttctttcctcgggggcaatcgtccggtaactattgtggcgccacctgcggaa
aagaaatgggaacttacggtcactgtcccggtggaagatatgtcagatctgccgactcag
gagcagggctcgactatcggggagtacgtcatcgatgatcctttgggactcaccggtgaa
tctgccttgcctacccagaattccatttggccgcatattgagcagcaggtttataaccag
gtgatgtctgccaaatccaccattgtctttgtaaattccagacgctcggcggaacgcctt
actagtcgcttaaatgaaatctgggcgctggagcatgatccggaatcgctatcaccagaa
ttgcggcgccccccagcacaggtcatgggaagtgatgttgcaggcaaagcgccacaggtg
attgcgcgtgcccatcatgggtcagtgtccaaggacgagcgggccctcactgaaacgatg
ctgaaggaggggcgtttaaaagccgttatttccacctcctccctcgagttgggtatcgat
atgggtgcggtggagcttgtcatccaggtggaatcaccgccgtccgtggcaagtggtctg
cagcgcgtggggcgcgcggggcactttgtgggggcgacgtcgataggctccttttatccc
aaacaccgctcagatttggtgcaaaccgcggtcactgtgcagcgcatgaaagagggcctt
atcgaggagctaaaagtccccaaaaatgcccttgacgtgctggcacagcaaactgtcgcg
gccgtgtccatagcggatgttaatgtcgacgagtggtacgagattgtgcggaaatcttat
ccctatagggagttggccagggaggtttatgattcagtcattgatttagtgagcggggta
tatccctccacggattttgcggagctgcggcctcgcgtggtctttgaccgtgtctccgga
atgcttgaatcgcgtcccggcgcgcaaagagttgccgttaccagtggtggcactattcca
gaccgtggcatgtttggcgtgtttttggttggcgatggtccgcgccgggtaggtgagctt
gatgaagagatggtctatgagtctcgggtgggagatgtatttaccctcggcgcctccagt
tggcgtattgaggagatcacgcgtgatcaggtgatcgttacccctgcgccggggcacact
ggccgcctgccgttttggactggcgatgccgccgggcggcctgcggagctcggcaaagcc
ttgggagcttttcgacgcaccaccctcgctgatcccgcgtcttctggattagagggctgg
gcacatgacaatctcattgctttcctgcaggaacaagaggaagcaacgggagtgctccct
gatgaaaaaaccctggttcttgagcgttttagggatgaactaggggactggcgcattgtt
ttgcacaccccttatggacgcggggttaatgctgcgtgggcacttgccattggggcaaaa
attgcggaagcaacgggaatggatgcgcaggctgtttcgggagatgatggcattgtactg
cggcttccagatggcgaagagcccagcggtgccttgtttatgtttgatgcggaagaaatc
gaaaagatcgtcactgagcaggtgggaaactccgcacttttcgccagtcgcttccgagag
tgcgcagcacgtgctttgttgctgccgcgtcgtaatcctggaaagcgtgcacctttgtgg
cagcagcgccagcgcgcagcccaactactggacgtggcacggaaatatcctagttttccg
atcattttggaaacggttcgcgaatgtctccaagacgtttatgatctgccggccctgaag
caattgattgaggatctgcagctgcgccgggtgcgaattgtggaggtcaccacccagcag
cccagcccctttgcttcttctttgctctttaactacaccggtgcctttatgtatgagggc
gatagtccgctggcggaaaagcgcgcagcagcccttgctctcgatccaactctcttggca
aagctgctgggggaagttgagctaagacaacttctcgatccagatattattcaggaggtc
cacgatcaactgcgccgggtaagcgaccgagctgcgcgaaataatgaagagctggccgat
tctctccgtattcttggtccaattccactggatgaactaggcgaacacatcacctttgat
gatcctgacttaggtgatcgtgccatgacggtgcgaattaatggacgcccgcacttagcg
caagttcttgacgcaccactgctgagagatgctttgggagtcccagtgcctccgagagtt
ccggcgcaggtggaaaccatcactgatgccatggaacagctggttaaccggtgggtaaga
actcgtggaccatttgtggcacaagacctcgcggatgcctttgggctaggaattgcccaa
gcaatcacctatttgcgagcagctcccgtcacggagggtcatttccggcaagggatagcc
gcgcaggaatattgcgccacggaagtcttgggcattatccgcaggcgcagccttgccttg
gcgcggaaacaaacaaggccggtgtcgcagacggcttatgcgcgtttcttgttggattgg
cagcaggtagcgcccgtcggcaagcgtccgacgctgcgcggggttgatggtacctattcg
gttattgagcagctcgctggcgtgcgtttgccagctagcgcgtgggaggatttggtgttg
cctgcccgcgtggattattcgccggcacatttggatgagctcactgctaatggggaagtc
ctgattgtcggtgccggccaagccggcagccgtgacccctggatcaccttgttgcccgct
gacttcgctgagcagctggtgggggcggcgtcgacaagcttgacgcctttacaagaagca
gttgtggaacagcttaaaccgggtggcggtttcctttttagtgatattttggcggcgaat
tttggctataccgcgagccaactgcaggaagctatgtggggattggtggaagctggcgtt
gtcagccccgacagctttgcgccgatccgcgcgcgcctggcgtctggtggcgcgcataag
gccaagcggcgtcccacacgctccagggtgcgcacccgcaccacctttaacaccgaagtg
ccaccagatatgcgtggtcggtgggcattgaccgtgcaacctgccgacgcaaccagccgc
tcggtggcgcacggcgaggcttggttggaccgctacggcgtggtgacccggggcagcgtg
gttgccgaagacgtggttgggggcttcgcgctcgcttataaggtgctgtcggggtttgag
gaaagcggcaaagccatccgtggctacctcattgaaggtctgggcgccgcgcaattttcc
acgcccgcgatcattgaccgcctgcgcggcaacgatgattcccccgacgttgaggggtgg
ccctccggcgccaccgaccccgaggtctacctcattgccgccgccgatcccgccaacccc
tacggcgccgcgctgccgtggcccgagtccggaaaccgcgctgcgggcgcgatggtagtg
ctttgcgacgggatgctcctggcacatatttctcgcggcgggcgcacacttaatgttttt
cacgatgacattgagcgcattgcccgtgcgctagctacctatgatcgcctcaccgtagaa
aaaatcaacggagaaagtgtttttgattctccgctcttggcaaagttccgaagcttcggg
gcgtccatcactccgaagggaatgcgctttcgggaagtgatcagttttgatgatcaacta
cctgagcgaggggctcgaccatttcgtggaggcttcggacgctaa

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