Corynebacterium callunae: H924_04270
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Entry
H924_04270 CDS
T02507
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ccn
Corynebacterium callunae
Pathway
ccn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H924_04270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccn03019
]
H924_04270
03400 DNA repair and recombination proteins [BR:
ccn03400
]
H924_04270
Enzymes [BR:
ccn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H924_04270
Messenger RNA biogenesis [BR:
ccn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H924_04270
DNA repair and recombination proteins [BR:
ccn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H924_04270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
VMAP-C
RecQ_Zn_bind
HTH_Cmi2_C
HEM4
Glyco_trans_4_4
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
AGG66300
UniProt:
M1UE47
LinkDB
All DBs
Position
911143..913194
Genome browser
AA seq
683 aa
AA seq
DB search
MNTTREEANTLLAGIAGPGAQLRDDQWLAIDALVNKKQRMLVVQRTGWGKSAVYFIAAKL
LRARGAGAAVIISPLLALMRNQVAAAERAGIKAATLNSANMKQWEDIEKSVIGGDVDVLL
ISPERLNNPDFRSSILPRLAAETGLVVVDEAHCISDWGHDFRPDYRRIRDLLAGLGAQVP
VLATTATANDRVVEDVRAQLGEGTGVLRGELDRDSLYLSVVNLEDSTLRAAWLATHLKEL
KGSGIIYCLTVSAAHDLADALKALGWEVAAYTGRTEAGERERLEQALLNNELKALIATSA
LGMGFDKPDLGFVVHLGSPSSPVSYYQQIGRAGRGTDHADVILLPGVEDKAIWEYFASVS
FPAEEVVRQLLSVLTTEAQSTVKLESQVDLSRSRLEQVLKVLDVDGAVDRVRGGWVSTGQ
EWTYDAPRYAGLQEARHAEEVAMLEYQRSTSCRMLFLRQQLDDIHATVPCGRCDNCTGHK
WSENIDSGINLQVEQQLKSPGVRLPARKMWPSGISVKGKISGIKEGRALGRLNDIGRGPA
LKQLLESGHFIEDPWMGRIIEVLKNWDWQQRPANVVALGKPDVQATALTVEVAQAIARIG
RMNFAGLLNVAPGAVEVTAQNSAYRVEGLLNQWDWSAGLQLVDGPVLLVTDLFDTGWSVT
VAGTGIAQRSSLDVLPFALASRG
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaacaagagaagaagcaaataccttattagccggcattgctggtcccggcgcc
caattacgcgatgaccaatggctagcaattgatgccttggttaataagaaacagcgcatg
ctagtggtgcaaagaactggttggggcaaatcagccgtttattttattgccgccaaacta
ttgcgtgccaggggagctggggccgccgtgattatttccccgctattggcactgatgcgc
aaccaggtggcagcagctgagcgcgccgggatcaaagcagcaactctaaacagcgccaat
atgaagcagtgggaagatattgaaaagagcgtcatcgggggagatgttgatgtgctctta
atttctccggaacgccttaataatccagatttccgcagtagtattttgccacgtctagct
gcagagactgggctggtagtagtagatgaggcgcactgtatttctgactggggacatgat
ttccgcccagattatcgtcgtattagagatctacttgccggcctcggtgcacaggttcca
gtgctggcaactactgcaacagcaaatgaccgcgtggtggaggatgtacgggcgcaatta
ggtgaggggacaggtgttctcagaggcgagctggaccgtgattcgctttatctctctgtg
gttaatttggaagattccaccctccgggcagcttggctggcaacccaccttaaagagctt
aaaggttctggaattatctattgcctcacggtttctgccgctcatgaccttgctgatgca
cttaaagcactggggtgggaagtggccgcttataccggtagaaccgaggcaggagagcgg
gaacgcttagaacaagccttgttaaacaatgaacttaaagctctcattgctacctctgct
ttgggaatgggatttgataaaccagatttaggttttgtggtgcacctcggttccccaagt
tctcctgtgtcctattaccagcaaatcggccgtgccgggcgtggcacagaccatgcagat
gtaattttgctgcccggtgtagaagacaaggctatttgggagtatttcgcgtcggtatcc
ttcccagcagaagaagtagtgcgacagttacttagcgttttaaccaccgaagctcaatca
acggtcaagctggaatctcaagtagatctttctcgttcgcgactggaacaggtgctaaaa
gttcttgatgttgatggtgcagtagatcgtgttcgtggaggttgggtttccactgggcag
gaatggacttatgatgccccgcgctacgctggactccaagaagccaggcatgcagaagaa
gtagcaatgctggaataccagcgttcgacctcttgtcgcatgctctttttgcgccagcag
ctagatgatattcacgcgactgttccttgcgggcgctgcgataattgcactggccataaa
tggagtgaaaatattgatagtggaattaatctgcaggtggaacaacagttaaagtctcct
ggagtgcggcttccggcacgtaagatgtggccgagtggaattagcgtaaagggaaaaatt
tccggaattaaggaaggacgagcactgggccgactaaacgatatcgggcgtggacctgca
ctaaagcagttgctagaaagtggacactttattgaagatccctggatgggtcgaattatt
gaagtactcaagaactgggattggcaacaacgtccagcgaacgtagtggcattgggaaaa
cccgatgtgcaggcaactgctttaacagtggaggtggcacaggcgattgcgcgcatcggg
cgaatgaattttgccggtttacttaatgttgctccaggtgctgtggaggttaccgctcaa
aactccgcctatcgggttgaaggattgttaaatcagtgggattggtctgctgggctgcaa
ttggtggacgggccggtgctcttggtgactgacctttttgatactggttggtctgtcact
gtggcaggaactggaattgcacagcgcagttctttagatgttttgccttttgccttggct
agtcggggataa
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