Corynebacterium callunae: H924_12580
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Entry
H924_12580 CDS
T02507
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ccn
Corynebacterium callunae
Pathway
ccn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H924_12580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccn03400
]
H924_12580
Enzymes [BR:
ccn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
H924_12580
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H924_12580
DNA repair and recombination proteins [BR:
ccn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H924_12580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
zf-FPG_IleRS
Fapy_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
AGG67937
UniProt:
M1UWC3
LinkDB
All DBs
Position
2738475..2739284
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AA seq
269 aa
AA seq
DB search
MPEGHVIHRLAQELHKNFGDAELEATSPQGRFAREAALIDATPISRAEAFGKHLFVEFES
AHPENIVYIHLGLIGTLHFEPATETRGQIRLHLSNGEIAANLRGPQWCRLITDAERSAAI
AKLGADPIRDDADPLPIRLKVQRSQRSIGSLLMDQKLFAGVGNIYRAETLFRLGISPFTP
GSRIGTAQFEAMWDDLVLLMKAGVVAGRIDTVRPEHTPEAMGRPPRKDDHGGEVYTYRRA
GQPCLVCGTPIREQVMEGRNLFWCPSCQT
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaggacacgtgattcatcgcctcgctcaagagctgcataaaaatttcggcgac
gccgagctggaagctacctcgccccaggggcgatttgcccgcgaagcagcgcttatcgac
gcaacccccatctcacgtgcagaggcttttggaaagcacctctttgtggaatttgaaagt
gcccatccggaaaatattgtgtacatccatctcggtttgattggcaccttacattttgag
ccagctacagagactcgtggccagatccgtttgcacctttccaatggtgaaatcgcagct
aatttgcgtggcccgcaatggtgtcgcctcattaccgatgccgagcgcagtgctgccatt
gccaaattgggtgccgatcccattcgtgatgacgctgatccattgccgattcggctgaag
gtgcagcgttcacaacgcagcattggatctttgcttatggaccaaaaactctttgcaggt
gtgggcaatatctaccgtgctgaaacccttttccgattggggatttcaccttttactccc
ggttcgcgcataggtactgcgcagtttgaagcaatgtgggacgacctagtgttgctgatg
aaggcgggtgtggttgcagggcgaattgatactgtgcgccctgagcacactcccgaagct
atgggccgaccaccccgcaaagacgatcatgggggagaggtatatacctatcggcgtgct
ggccaaccttgtttggtgtgtggcactccaattcgggagcaagttatggaaggccgcaat
ctcttttggtgccccagctgccagacttaa
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