Campylobacter concisus 13826: CCC13826_0064
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Entry
CCC13826_0064 CDS
T00593
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cco
Campylobacter concisus 13826
Pathway
cco03420
Nucleotide excision repair
cco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCC13826_0064
03430 Mismatch repair
CCC13826_0064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cco03400
]
CCC13826_0064
Enzymes [BR:
cco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCC13826_0064
DNA repair and recombination proteins [BR:
cco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCC13826_0064
MMR (mismatch excision repair)
Other MMR factors
CCC13826_0064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
CarD_TRCF_RID
AAA_11
eIF3_p135
TMP_3
Motif
Other DBs
NCBI-ProteinID:
EAT97790
UniProt:
A7ZE49
LinkDB
All DBs
Position
1216107..1218176
Genome browser
AA seq
689 aa
AA seq
DB search
MENLLSNLNEAQREAATHIDGAMLILAGAGSGKTKTITTRLAYLIGEVGIDAANTLTLTF
TNKAANEMRSRAMAMLSQSGKNYSPLLCTFHKFGLLFLKLYIEKLGRKNNFVIIDTDDKK
RIIKSFESPVATAILSSEISNYKNSLLSVEEVYKNANFSSFDKSKDNFYKQAAQIYEKYE
DYLKANNLVDFDDLLGLTYKILDENEDLAREISNRYKYIMVDEYQDTNDLQYKLLKKLCL
CHENICVVGDDDQSIYGWRGAKIDNILNFKDQFSEVKIIRLEKNYRSSEAILKAANELID
HNRNRLGKKLVGTKGEGEAVNLIESFDENLEAGKIAKNIKELLSKGVQAKDIAILYRINA
LSRSLEDGLNKEQIAYKMVGGVKFYERAEIKDIISYLRLINNPNDDFSIRRIINRPKRGL
GKVSLDKLEKMAFEGKISIFEAISNISDNDEAFSKKVKSALLEFANNLKELQESSSVFDL
IDKFEAKFGVKKYYESLPDGAERAANIDEFYAVLKDQIKQNPSFDLEEFLNEITLTSEQD
GISDEAISIMSVHASKGLEFEHLFVIGLEEGFFPLIGDGSDIEEERRLAYVAITRAKKTL
SLSFANSRFYKGQRTRLNKSRFLSESGITHGSLVIEQSNEFKKGDLVKHKIFGIGRVSAV
SKIKKEFKLTINFGGNVREIMSSFVEKAV
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttactatcaaatttaaacgaagcccagcgcgaagcagccacccacatagac
ggtgcgatgctcatactagcaggagctggcagcggcaagacaaagacgatcacgactagg
cttgcctatctcatcggcgaggtcggcatagacgcggcaaacacactaactcttactttt
acaaacaaagccgccaacgagatgcgcagcagagccatggcgatgctaagccaaagcggc
aaaaactactcgccgctactttgcacatttcacaaatttggacttttgtttttaaagctc
tacatagaaaagcttggcagaaaaaataactttgtcatcatcgacacagacgataaaaaa
cgcatcatcaaaagctttgaaagtccagtcgccacggcgatactctcaagtgaaatttca
aactacaaaaactcacttttaagcgtcgaagaggtctataaaaatgcaaatttctcctct
tttgacaagagcaaggacaacttttataagcaagcagcgcaaatttatgaaaaatacgag
gactatttaaaggcgaacaaccttgttgattttgatgatttactagggcttacatataaa
attttagacgaaaacgaagatcttgctagagaaatttcaaaccgctacaaatacataatg
gtcgatgagtatcaagacaccaacgaccttcagtataaactactaaaaaagctctgccta
tgccacgaaaacatctgcgtagtgggtgatgatgaccagagtatttatggctggcgaggt
gcgaagatagataatatcttaaatttcaaagaccagtttagcgaggtaaagattatcaga
cttgagaaaaactatcgctcgagtgaagcgatactaaaagctgcaaacgagctgatagac
cacaatcgcaaccgccttggcaaaaagcttgtgggcacaaaaggcgaaggcgaagctgta
aatttgatagagagctttgatgaaaatttagaggctggcaagatcgcaaaaaacataaaa
gagcttttaagcaaaggcgtgcaggccaaagatatcgcgatcttataccgcataaacgcg
ctttctcgctcacttgaagatgggctaaacaaagaacagattgcctataaaatggtaggc
ggagttaaattttacgaaagagccgagatcaaagatatcataagctacctaaggctgata
aacaatccaaacgatgacttttcaataagacgcatcatcaaccgcccaaagcgcggccta
ggcaaagtaagccttgataagctcgaaaaaatggcctttgagggcaaaatttccattttc
gaggcgatctcaaacatctctgataacgacgaagcctttagcaaaaaggtaaaatcagcc
cttcttgagtttgcaaacaacctaaaagagcttcaagaaagcagctcggtttttgacctc
atagataaatttgaagctaaatttggcgtgaaaaaatactacgagagcttgccagatgga
gctgaaagagcggcgaacatagacgagttttatgccgttttaaaagatcagatcaagcaa
aatccaagctttgatctagaagagtttttaaacgagatcacgctaacaagcgagcaagac
ggcattagcgacgaggctattagtatcatgagcgtgcatgcgagcaagggacttgagttt
gagcacctttttgtgatcggccttgaagagggatttttcccgctcattggcgatggtagc
gacatcgaagaggagcgcaggctagcttacgtggcgataacaagagccaaaaagacactt
agcctaagctttgcaaattcgcgcttttacaaaggtcagcgcacgaggctaaataagagt
agatttttaagcgagagcggtatcacgcatggctcgctagttatcgagcagagcaatgaa
tttaaaaaaggcgaccttgttaaacataaaatttttggtatcggcagggtgagtgcggtt
agcaagatcaaaaaagagtttaaactgactataaattttggtggcaatgtaagagagatc
atgtcaagcttcgtggaaaaggccgtatga
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