Campylobacter concisus 13826: CCC13826_0175
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Entry
CCC13826_0175 CDS
T00593
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cco
Campylobacter concisus 13826
Pathway
cco03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cco00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CCC13826_0175 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cco03021
]
CCC13826_0175 (rpoC)
03400 DNA repair and recombination proteins [BR:
cco03400
]
CCC13826_0175 (rpoC)
Enzymes [BR:
cco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CCC13826_0175 (rpoC)
Transcription machinery [BR:
cco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CCC13826_0175 (rpoC)
DNA repair and recombination proteins [BR:
cco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CCC13826_0175 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
EAT97378
UniProt:
A0A158SUG0
LinkDB
All DBs
Position
664992..669506
Genome browser
AA seq
1504 aa
AA seq
DB search
MKLTNLKPVEIKEEHRPRDFEAFQLRLASPEKIKSWSYGEVKKPETINYRTLKPERDGLF
CAKIFGPIRDYECLCGKYKKMRYKGIKCEKCGVEVTTSKVRRSRMGHIELVTPVAHIWYV
NFLPSRIGALLGIKMKDLERVLYYEAYIVDNAGEAYYDNENSKKVEKYDVLNEEQYQSLA
SRYEETGFTARMGGEVIYDMLAELDLTQILNQLKEEMEATNSEAKKKTIVKRLKVIESFL
NSGNRPEWMMITNLPVLPPDLRPLVNLDGGKFAVSDVNDLYRRVINRNSRLKRLLELDAP
EIIIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVD
FSGRSVIVVGPKLKMDQCGLPKKMALELFKPHLLARLEEKGYATTVKQAKKMIEDKTNEV
WECLEEVVKDYPVMLNRAPTLHKLSIQAFHPVLVEGKAIQLHPLVCAAFNADFDGDQMAV
HVPLSQEAIAECKILMLSSMNILLPASGKAITVPSQDMVLGIYYLSLERNDEKGANKIFS
SVDEVMIAEEANTLGLHAKIKTMVDNKIIFTTAGRLILRAILPDFVPENMWNKIMKKKDI
ANLVDYVYRNGGLEVTADFLDKLKNLGFRYATKAGISISIADIIVPDSKQKYIDEAKKKV
REIQKQYGAGLLTDSERYNKIIDIWTDTNNSVASEMMKLIQSDKGGFNSIYMMADSGARG
SAAQIRQLAGMRGLMAKPDGSIIETPIISNFREGLNIMEYFNSTHGARKGLADTALKTAN
AGYLTRKLIDVAQNVKVTMHDCGTHEGVEITDITESGELIESLEERVLGRVLADDVIDPI
TNEILFSEGTLLDEEKAKAITEAGIKSVSIRTPITCKAPKGVCAKCYGLNLGEGKLVKPG
EAVGIISAQSIGEPGTQLTLRTFHIGGTASTEQQDRQVIAQKEGFIRYYNLSTYENNGKK
IVANRRSAAVLLVEPKIKSTIDGKIEIEYAHEDVNIVIKGKKEEIKYTIRRNDLAKPNEL
AGVSGKIEGKMYIPYANGDKVKENESIVEIIKEGWNIPNRIPYASELKISDGDPVTRKIT
ADANGVVKFFILKGDFLDRLKDIKKGHKVTEKGFFVVVSDKDGREAVRHYIPRNSIIQVS
DNDAVERATVVSLPEKDDKLIIAEWDPYSTPTIAEEAGVVSFEDVEPGYSATEQADEATG
QRRLVINEYLPSGVKPAIIITTKSGHLIKYPLDPKTAIFVSSGDEVAQADILAKTPKAVA
KSKDITGGLPRVSELFEARRPKNTAIVAEIDGVVRFDKPLRSKERIIIQAEDGTTAEYLI
EKSRQIQVRDGEFVHAGEKLTDGLISSHDILRILGEKALHYYLISEIQQVYRRQGVAIAD
KHIEIIVSQMLRQVKIVDSGNTNFIVGDMVSRNKFKEENERIMKMGGEPAIAEPILLGVT
RAAIGSDSVISAASFQETTKVLTEASIAAKFDYLEDLKENVILGRMIPVGTGFYKDKKIK
IKEN
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaactaatttaaaaccagttgagataaaagaagagcatagacctcgtgatttt
gaagctttccaacttcgtttagcaagtcctgagaagataaaatcttggagttatggcgag
gttaaaaaaccagaaactatcaactaccgcacgctaaaacctgagcgtgacggcttgttt
tgtgccaaaattttcggaccgatccgtgactacgagtgtctttgtggtaaatataaaaag
atgcgctataaaggtatcaagtgtgaaaagtgcggcgttgaagtaacaacatctaaggtt
cgtcgctctcgcatgggtcatatcgagcttgtaactccagtggctcacatctggtatgta
aatttcttgccaagccgtataggtgcgcttcttggtatcaagatgaaagaccttgagcgc
gtactttactatgaggcatacattgttgataatgctggcgaggcttactatgacaatgaa
aattctaaaaaagttgaaaaatatgacgttttaaacgaggagcaatatcaaagcctagct
tcaagatatgaagagactggctttacagcaagaatgggtggcgaggtcatctatgatatg
ctagctgagcttgatctaactcaaattttaaatcaactaaaagaagagatggaagctaca
aattctgaggctaagaaaaaaaccatcgtaaaacgcctaaaagttatcgagagcttttta
aattcaggcaaccgcccagagtggatgatgataacaaatttaccagttcttccgcctgac
cttagaccacttgttaatcttgatggcggtaaatttgctgtttcagacgtaaacgaccta
tatcgccgtgtaataaatagaaatagccgtctaaaacgcctgcttgagcttgacgcacct
gagatcattatcagaaacgaaaagagaatgcttcaagaggctgttgatgcactatttgat
aatggccgtagagcaaatgcagtaaaaggtgcaaataaacgcccactaaaatcactaagt
gagatcatcaaaggtaagcaaggccgcttccgtcagaatttgctaggtaagcgtgttgat
ttctctggacgttctgttatcgtcgttggtccaaagctaaagatggatcagtgcggtctt
ccaaagaagatggctttagagctatttaaaccacatttgcttgctcgccttgaagaaaaa
ggctatgcgacaactgttaagcaagctaaaaagatgatagaagataagacaaatgaggtt
tgggagtgcctagaagaggtcgttaaagactatccagttatgctaaaccgtgctccgaca
cttcacaagctctctatccaggcgtttcacccagtgcttgttgagggcaaggcgatccag
cttcacccgttagtttgtgcggcgttcaacgctgactttgacggcgaccaaatggctgtt
cacgtgccactatctcaagaggctatcgctgagtgcaaaattttgatgcttagctcaatg
aacatcttgcttcctgcaagcggtaaggctatcacagtcccttcacaagatatggtttta
ggaatttattacctaagcttagagagaaatgacgaaaaaggtgcaaataaaattttctca
agcgtcgatgaagtaatgatcgctgaggaggctaatacccttggtcttcacgctaaaatt
aagacaatggttgataataagatcatctttacaacggctggtcgcttgatcctaagagcg
atactacctgattttgtccctgaaaatatgtggaataagatcatgaagaaaaaagacatt
gcaaatttggttgattatgtttatagaaatggcggccttgaagtaacggccgacttcctt
gataagcttaaaaatttaggctttagatatgctacaaaagcgggaatttctatctctatc
gcagacatcatcgtgccagatagcaagcaaaaatatatcgacgaagccaagaaaaaagtt
cgtgaaattcaaaagcaatacggtgctggtcttttaacagatagtgagagatataacaag
atcatcgatatctggacagatacaaataacagcgttgcaagcgagatgatgaagcttatc
caaagcgataagggtggatttaactcaatttatatgatggctgactcaggtgcgagaggt
agtgcagcgcaaattcgccagctagctggtatgcgtggtcttatggcaaaaccagatggc
tcgatcatcgaaacaccgatcatttcaaacttccgtgaaggtctaaacataatggagtac
ttcaactcaacccacggagctagaaaaggtcttgcagataccgcgctaaaaactgccaac
gctggttacctaacaagaaaactaatcgacgttgctcaaaacgttaaagtgacaatgcac
gattgcggtactcacgagggcgttgagatcacagatatcacagagagtggcgagctaata
gagagccttgaagagagagtattagggcgtgttttagcagatgatgtgatcgatcctata
acaaatgaaattttatttagcgaaggcactttacttgatgaagagaaagctaaggctata
acagaagctggcataaaatcagtaagtattagaacacctatcacgtgcaaggcgccaaaa
ggcgtttgcgcaaaatgctacggattaaatttgggcgagggcaaacttgtaaaaccaggc
gaggctgtcggtatcatctcggctcaatcaatcggtgagccaggtactcagctaacgcta
agaacattccacattggtggtacggcttctactgagcaacaagaccgccaagtcatcgct
caaaaagagggctttattaggtattacaaccttagtacatacgagaacaacggcaaaaag
atcgttgcaaacagaagaagtgcagctgtgctacttgttgagccaaagataaaatcaaca
attgatggtaaaatcgagatcgaatatgctcacgaagacgtaaatatcgttatcaaaggc
aaaaaagaagagatcaaatatactatcagaagaaacgaccttgctaaaccaaacgaacta
gctggcgttagtggtaagatcgaaggcaagatgtatatcccttatgcaaatggcgacaag
gtaaaagagaatgagagtatcgtcgagatcataaaagagggttggaatatcccaaatcgt
atcccttatgctagtgagcttaaaatttcagatggcgatccagtaactagaaagatcaca
gcagatgcaaatggtgtggttaaatttttcatactaaaaggtgacttccttgatagacta
aaagatatcaaaaaaggtcacaaagtaactgaaaaaggcttctttgttgtcgtctctgac
aaggacggacgtgaggcagttcgccactacatcccaagaaattctatcatccaagtatca
gataatgatgcggtagaaagagcgacagtggtctcactacctgaaaaagatgacaagcta
ataatcgctgagtgggatccatactcaactccaactatcgcagaagaggctggtgtggtt
agttttgaagatgtcgagccaggatatagtgcgactgagcaagctgacgaggcaactggt
caaagacgtcttgttatcaacgagtatttgccaagcggcgtaaaaccagcgatcattatc
actacaaagagcggacatttgataaagtatccgcttgatccaaaaactgcgatctttgtt
tcaagtggcgacgaagtggcccaagctgacattttggctaagactccaaaagctgttgct
aagtcaaaagacattaccggtggtcttccaagagttagtgagctatttgaagcaagacgc
cctaaaaatacagctatcgttgcagagatcgatggcgttgttagatttgacaagccactt
cgctcaaaagagcgcatcatcatccaagcagaagatggcacgacagctgagtatttgatc
gagaagagccgccagatccaagtaagagacggagaatttgttcatgctggtgagaaactg
acagacggacttatctcaagccacgatatcttaagaattcttggtgaaaaggcgcttcac
tactatttgatcagtgaaattcagcaagtttatcgccgccaaggtgttgcgatcgctgat
aagcatatcgagatcatcgtctctcaaatgcttcgccaagtcaaaatcgtcgatagtgga
aatacaaatttcatcgttggcgacatggtttcaagaaacaaatttaaagaagagaatgag
cgcatcatgaaaatgggtggcgagccagctattgctgaaccgatccttcttggtgttaca
agagcggctatcggaagtgatagtgtgatctctgctgcatcattccaagagacaactaag
gtcttaacagaagcgtcaatcgctgctaaatttgactatcttgaagatctaaaagagaac
gtcatccttggacgtatgatcccagttggtactggtttttataaagataaaaagataaag
atcaaagaaaactaa
DBGET
integrated database retrieval system
