Campylobacter concisus 13826: CCC13826_0485
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Entry
CCC13826_0485 CDS
T00593
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cco
Campylobacter concisus 13826
Pathway
cco03030
DNA replication
cco03430
Mismatch repair
cco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCC13826_0485 (dnaE)
03430 Mismatch repair
CCC13826_0485 (dnaE)
03440 Homologous recombination
CCC13826_0485 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cco03032
]
CCC13826_0485 (dnaE)
03400 DNA repair and recombination proteins [BR:
cco03400
]
CCC13826_0485 (dnaE)
Enzymes [BR:
cco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCC13826_0485 (dnaE)
DNA replication proteins [BR:
cco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCC13826_0485 (dnaE)
DNA repair and recombination proteins [BR:
cco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCC13826_0485 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
tRNA_anti-codon
PPR_2
Motif
Other DBs
NCBI-ProteinID:
EAT99201
UniProt:
A7ZEW7
LinkDB
All DBs
Position
complement(1490292..1493903)
Genome browser
AA seq
1203 aa
AA seq
DB search
MSENSGFTHLHLHTEYSLLDGANKIEELAHTLHDRGDTAAAITDHGNMFGAIDFYKKMKK
NGIKPLIGIEAYVHNGEQLDDKSTKQRFHLILIAKNETGYKNLMYLSSMSYIEGFYYYPR
INKKILKEHSEGLVCSSACLQGEVSWHLNLSERNVKFGAKGYERAKEVALEYKEIFGDDF
YLEIMRHGIGDQRRIDDDILRIAKETGIKVIATNDTHYTFKERAAAHEVFMCIAMNKTLD
DPNRLRHSVHEFFVKSKEQMNELFLDIPEVIENTQEIVDKCNLEIKLGNPTPPNFKFTLE
CAKERNLTLPEPENRYSFKNDAVFFEHECRKGLEERLKFVPENLHEEYRKRLEIEISIIN
KMNFPGYMMIVWDFINEAKRRGVPVGPGRGSAAGSLVAYSLKITDLDPIPYNLLFERFLN
PERVSMPDIDVDFCQSRRGEIIDYVTQKYGKFNVAGVITFGKLLAKGVIRDVARVCDMPY
AEADAMAKLIPDELNITLKDAYDKEPKIAELISQNPKAAKIWKFALDLEGLNRNAGQHAA
GVVISNEELWNKTPLFRQPNSPEDRFVTQYSLKYLEDVDLIKFDFLGLKTLTVIDNAIKL
VKQRTGREIVWEQVDKNDSGVYKMIQSGQAIGIFQIEGEGMRKLGTSLRPDCFEDIVAML
ALYRPGPMESGMLDDFVKRKHGEAEITYAFKELEPILAPTYGVIVYQEQVMQIVQAIGGF
SLGGADLVRRAMGKKIKEEMDRLKGEFVKGAEAKGLNGQKADDLFELIVKFAGYGFNKSH
SAAYAYVTFQTAYLKAYYPAEFMAALLTSEESNVDKIVRYIDEIKRINIDTLPPSINKST
KEFSVVKNGEHDGIIFGLGAIKGVGGAAIENIIAERDAKGEFKSMDDFVSRIDPFKVNKK
VFESLIKAGCFDEFGFSRKMLLQNVENIVEACKNAAQIRKNAAESLFGEDDSMNDVKINF
VTINDEFDIKQILKFEQESVGIYLSGHPLDDYKDEINKIKYTLSSEFESLPQSAEILVVG
KIEDFSTRITKSGKKMGTINVLDFHGNIEIAVFERELGNIEDIVKDEAKRDLPYAFRINI
SRDDQFVRTNLNEVYSLEDAQNLDFKTRKLKQNSKFSKNEEASAPQKAREYAELEVLLML
SELSRQKLEQIYSLVFSKNAPNNQKRLILKIKNEATGEIFIYKTEFIVSDDVGEEIEKLA
ASA
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaattctggctttacacacctacatttacacaccgaatactccctactagac
ggagctaacaagatagaagagctagctcatacgctccatgacagaggtgacacggcagca
gcgatcacggatcacggcaacatgtttggcgcgattgatttctacaaaaagatgaaaaaa
aatgggataaaaccgctaattggcatcgaggcttacgtgcataacggcgagcagcttgat
gataagagcaccaaacagcgctttcacctcatcttaatcgccaaaaatgagactggctat
aaaaatcttatgtatctaagctctatgagctacatcgagggcttttactactacccccgt
atcaataaaaaaatcttaaaagagcacagcgaggggctagtttgcagctctgcttgcttg
cagggcgaggtaagctggcatctaaatttaagcgagcgtaacgttaaatttggcgctaaa
ggctatgagagggcaaaagaggtcgcgcttgagtataaagaaatttttggcgatgacttt
taccttgagatcatgcgccacggcatcggcgatcaaagacgtatagacgatgacatttta
cgtatcgcaaaagagactggcatcaaggtcatcgccacaaacgacacccactacactttt
aaagaaagagccgctgcgcacgaggttttcatgtgcatcgcgatgaacaaaaccttagac
gatccaaaccgacttcgccacagcgtccatgagttttttgttaaaagtaaagagcagatg
aatgagctatttttagacatccctgaagtgatagaaaacacccaagagatcgtggataag
tgcaatcttgagatcaagcttggcaacccaactccgccaaattttaaatttactcttgag
tgcgccaaagagagaaatttgaccctcccagagccagaaaacagatatagcttcaaaaat
gatgctgtttttttcgagcacgagtgcaggaaaggccttgaagagaggctgaaatttgtc
ccagaaaatttacacgaggagtatagaaaacgccttgagatagagatcagtatcatcaat
aagatgaatttcccaggatatatgatgatcgtttgggacttcattaacgaagccaagcgc
agaggcgtgccagttggcccaggacgtggctccgcggctggtagcttggtcgcttactcg
ctaaagataactgaccttgatcctatcccatacaacctgctttttgagagatttctaaac
ccagagcgcgttagcatgccagatatcgacgtggatttttgccaaagcagacgtggcgag
atcatcgactatgtcacgcaaaaatacggcaaatttaacgttgctggcgtcattacattt
ggtaaattgctcgcaaagggtgtcattagagacgtcgctagagtctgcgacatgccttat
gcggaggctgatgcgatggctaaacttatccctgatgagcttaacatcacgctaaaagat
gcctacgataaagagccaaagatagctgaactaataagtcaaaacccaaaggcggctaaa
atttggaaatttgcccttgaccttgagggactaaacagaaatgctggccagcacgcagca
ggcgttgtcatctcaaacgaagagctttggaacaaaaccccgctatttcgccagccaaac
agcccagaagatcgctttgtcacgcagtatagtctaaaatacctagaagacgttgattta
ataaaatttgactttcttggccttaagacgctaacggttatcgacaatgcgatcaagctc
gttaaacagcgcactggcagggagatcgtctgggagcaggtcgataaaaacgactctggc
gtttataagatgatacaaagtggccaagccatcggcatctttcagatagagggcgagggc
atgagaaagctaggaactagcctgcgcccagactgctttgaggatatcgtcgcgatgctg
gcactctaccgaccaggaccgatggagagtggtatgcttgatgacttcgtcaaaagaaaa
catggcgaggcggagataacatacgcatttaaggagcttgagccgatccttgcgccaaca
tacggcgtcatcgtctatcaagagcaagtcatgcagatcgtgcaagccataggcggtttt
agcttaggcggtgcggaccttgtgcgccgtgcgatgggtaaaaagatcaaagaggagatg
gacaggctaaagggcgagtttgtaaaaggtgctgaggctaaggggctaaatggccaaaaa
gcggatgatcttttcgagttgatcgttaaatttgcaggatatggctttaacaagtctcac
tccgcagcatacgcttatgtcacgtttcagacggcttatctgaaggcttactatccggct
gaatttatggcggcacttctaacaagcgaggagagcaacgtcgataagatcgttcgctac
atcgatgagataaaacgcataaacatcgatactttgccaccatctatcaacaaatcaacc
aaagaatttagcgtcgttaaaaatggcgagcacgatggcatcatctttgggcttggagcg
attaagggcgttggcggagcggcaattgagaacatcatcgctgagcgcgacgcaaagggc
gagtttaagagcatggatgactttgtttcaaggatcgatccatttaaggtcaataaaaag
gtctttgaaagccttataaaagctggctgcttcgatgagtttggctttagccgcaagatg
cttttgcaaaatgtagaaaatatcgtagaagcttgcaaaaatgctgctcagatacgtaaa
aacgcggctgagagcctctttggcgaagatgatagtatgaatgatgtgaagataaatttc
gtcactataaatgatgaatttgacatcaaacagatcctaaaatttgagcaagagagcgtt
ggtatctacctctcaggacatccgcttgatgactataaagatgagataaataagatcaaa
tacacgctaagctcggagtttgagagcttgccgcagagtgctgaaattttagtggtcggc
aagatcgaggactttagcacgaggatcacaaaaagcggcaaaaaaatgggcactataaat
gtgcttgactttcacggcaacatcgagatcgccgtctttgaaagggagcttggcaacatc
gaagatatcgtaaaagacgaggcaaagcgcgatctgccttatgcattcaggataaatatc
tcgcgcgacgatcagtttgtaaggacaaatttaaatgaggtttatagcctagaagatgcg
caaaatttagactttaagactagaaaactaaagcaaaactctaaatttagcaaaaatgaa
gaggcgagcgctcctcaaaaagcaagagagtatgccgaactagaggtgcttttgatgctg
agcgagcttagcaggcaaaagctggagcaaatttactcgctagtttttagcaaaaatgct
ccaaataatcaaaaacggctaattttgaagataaaaaatgaagcaactggcgaaattttc
atctataagactgagtttatcgtaagtgatgatgtgggcgaggagatagaaaagctcgcg
gcttcagcgtaa
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