Campylobacter concisus 13826: CCC13826_1041
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Entry
CCC13826_1041 CDS
T00593
Symbol
truD
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cco
Campylobacter concisus 13826
Brite
KEGG Orthology (KO) [BR:
cco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cco03016
]
CCC13826_1041 (truD)
Enzymes [BR:
cco01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CCC13826_1041 (truD)
Transfer RNA biogenesis [BR:
cco03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CCC13826_1041 (truD)
Prokaryotic type
CCC13826_1041 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
EAT97828
UniProt:
A7ZD44
LinkDB
All DBs
Position
840044..841168
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AA seq
374 aa
AA seq
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MQEATTFKPLYALTHAPIEAYFSKNSDDFVVREIPLYEFSGDGEHLIVEISKKDMTTSDA
LHALSEVTGAKMRDFGYAGLKDKQGMTTQFISMPRKFESALANFSHEKMKILNLNVHKNK
LRIGHLKGNSFFIRLKKVLPSSAKKLEQAFVSIDKMGYANYFGYQRFGKFGDNAETGLEL
LKNGTINGKKSKNVKLNDFLISAYQSDLFNRYLSKRVEISRFVSDFSLSELGEIYKNFSK
NDIKAMKAQESFFKLLPGEVLGHYPFGKLFLCENLDQEAQRFAKRDITSLGLIVGAKAYE
ASGMAKELEDEIFAEAFSLTSKITGSRRFNWAYLENTSYKYNEENAHFSLNFTLQKGSYA
TVVLEEILHKNIFE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagccaccacttttaagccgctctatgcgctaactcatgcgcccatcgaggca
tatttttctaaaaattcagatgattttgtcgtgcgcgagataccgctttatgaatttagt
ggcgacggcgagcacttgatcgttgaaatttctaaaaaagatatgacgacaagcgacgct
ttgcacgccttaagcgaggttacaggggctaagatgcgcgactttggctatgctggacta
aaggataaacagggcatgacgacgcagtttatctcgatgcctcgtaaatttgagagcgcg
cttgcaaactttagccatgaaaagatgaaaattttaaatttaaacgtgcataaaaacaag
cttcgcatcggacatctaaagggcaatagctttttcatccgcctaaaaaaggtgctgcca
agtagcgctaaaaagctcgagcaggcctttgtcagcatcgataaaatgggctatgcaaac
tactttggctatcagcgctttggcaaatttggcgacaatgctgaaactgggctggagcta
cttaaaaatggcacgataaatggcaaaaagagcaaaaatgtaaagctaaatgactttttg
atctcagcctatcaaagcgatctttttaaccgctatcttagcaaaagggttgaaatttca
aggtttgtgagtgactttagcctaagtgagctgggtgaaatttataaaaactttagcaaa
aacgatataaaggcgatgaaggcgcaggagagcttttttaagcttttgccaggagaggtt
ttggggcactatccatttggcaagctctttttgtgcgaaaatttagatcaagaggcgcaa
agatttgctaagcgtgatatcacaagcctcggacttatagtcggtgcaaaggcctatgag
gcaagcggcatggcaaaagagcttgaggatgaaattttcgctgaggcattttcgcttact
tcaaagatcactggctcaaggcgctttaactgggcgtatcttgaaaatacaagctacaaa
tacaacgaagaaaacgctcattttagcttaaatttcacacttcaaaagggctcatacgcc
acagttgtgttagaagaaattttgcataaaaatatatttgagtag
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