Campylobacter concisus 13826: CCC13826_1309
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Entry
CCC13826_1309 CDS
T00593
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cco
Campylobacter concisus 13826
Pathway
cco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCC13826_1309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cco03019
]
CCC13826_1309
Messenger RNA biogenesis [BR:
cco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CCC13826_1309
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
KH_1
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
EAT97318
UniProt:
A7ZDR5
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All DBs
Position
complement(1090608..1092161)
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AA seq
517 aa
AA seq
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MIEVLIGLGAGVVGVGAGYLYAKKINDANYNIFLEQAKAKAKAIEYEAELTLKNSKISVQ
EAEFEAKKRYDDKTTKLQKEYASKFDELTKKEKILLNEQELLNESKELFEKDKQDAKVTY
EEGLNLKATYQNKVEEAIRVLEHAAGLTEEEAKEVVLKKVEEKSRADIAHIVRKYEEEAK
REAKKRVNYILAQATSRFAGEFAAERLINVVNIKNDELKGRIIGKEGRNIKTLEMVLGVD
IIIDDTPHAIILSSFNLYRRAIATRVIELLVEDGRIQPARIEDLHKKVTEEFEQSIQEEG
ENIVMDLGLNKIHPEIVKLIGKLKFRASYGQNALAHSLEVAHLAGIIAAECGGDEKLAKR
AGILHDIGKALTHEYEGSHVDLGAEICKRYKEHPVVINAIYAHHGHEEATSIESAAVCAA
DALSAARPGARREVLESFLKRVEEIENIAKSKEGIKQAYAINAGREIRVIANAKLINDDE
AVLVAKEIAQEIESKVQYPGEIKVSVIRETRAVDFAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgatagaggttttaataggcttaggagccggtgtggtgggcgttggagcagggtatctc
tacgccaaaaagataaatgatgcaaactacaacatatttttagagcaggcaaaagcaaag
gcaaaagccatcgagtatgaagctgagctaacgcttaaaaactctaaaatttcagtgcaa
gaggctgaatttgaggctaaaaaaagatacgatgacaagactacaaagcttcaaaaagag
tatgcaagtaaatttgatgagctaaccaaaaaagagaaaattttgctaaatgagcaagag
cttttaaatgagagcaaagagctttttgaaaaagacaagcaagatgcgaaggtcacttac
gaagagggcttaaatttaaaagcgacttatcaaaacaaagtagaagaggcgataagagtg
cttgagcacgctgctggcttaacggaggaagaggcaaaagaggtcgtgcttaaaaaggtc
gaggaaaagtcgcgtgccgacatcgctcacatcgttagaaaatacgaagaagaggcaaaa
agagaggctaaaaagagggttaattacatcttggcacaggctacgtcaagatttgctgga
gaatttgcggctgaacgtctaataaatgtcgtaaatatcaaaaacgatgagctaaaaggt
aggatcatcggcaaagagggacgtaacatcaaaacccttgaaatggtgcttggcgttgat
atcatcatcgatgataccccacacgcgatcatactaagtagctttaacctttacaggcgt
gcgatcgcaacaagagtgatcgagcttttggtggaggacggtagaattcagcctgcgagg
atagaagatcttcacaaaaaagtgactgaagaatttgagcaaagcatacaagaagagggc
gaaaacatcgtcatggatcttggtctaaataaaattcatccagagatagtaaaactaata
ggcaagcttaaatttagagcaagctatggtcaaaacgcccttgctcacagccttgaagta
gctcaccttgctggcatcatcgcagcagagtgtggcggagatgagaagctagcaaaaaga
gctggcatacttcacgacatcggtaaggcgctaactcacgagtatgagggcagccacgtc
gatcttggagctgaaatttgcaaacgctataaagagcatccagtcgtcatcaacgcgatc
tatgctcaccatggccacgaagaggctacaagcatcgaaagtgctgctgtttgcgcagct
gacgcactaagcgcagctcgtccaggagcaagacgtgaggtgcttgagagcttcttaaaa
cgtgtcgaagagatcgaaaatatcgcaaaaagcaaagagggtatcaaacaagcttatgcg
atcaatgctggccgtgagatccgcgtcatcgcaaatgctaaactcataaatgacgatgag
gcagtgcttgtggcaaaagagatagctcaagagatcgagagcaaggtgcagtatcctggt
gagataaaagtaagcgtcatcagagagactcgcgctgttgattttgcgaaataa
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