Cyphomyrmex costatus: 108771235
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Entry
108771235 CDS
T11118
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
108771235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccoa03400
]
108771235
DNA repair and recombination proteins [BR:
ccoa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
108771235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
108771235
NCBI-ProteinID:
XP_018399181
LinkDB
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Position
Unknown
AA seq
937 aa
AA seq
DB search
TTTYKTANLCCIALLKKINFKNKALHITPSMNDSDDDSSDSSNDFAGITPKDELTASFFA
IKPVTKPNLVDSKDNSEDESSNDENFASVPENNSIELFSEVVKNLEASQRASVNDEEPKQ
HFSKYDSTQVTRKVKTEKKKNISDEINAVLLQGESGIHAFCKNDEDTNDEDTNDDEKQKE
DVKRPEDYAIPKEGVQITLPGTSMIFKKKTANKRESDLAALLRKKLKANQIIVEKAARLC
WLAYGFHLNHQANEPEIMATAVSLISTKSYPKDNFNLEYLEKFTKWFKNIFTIQSTDDQV
IINKETLLNRIAERKIYNYKELVILYVAILRGIGLHCRLVVSLNPPLVKTYNELLPKTST
VKKDSKIKDETKPKKTSSKEDKKNVNSKQHKKNVNSKETKKNVDSKKDLKNNSIIQNDEN
ARRNANEEAKKKAAEILRSKYSYNKKNKDKLNSNIAIQDNASTSKSIETASTSSRKVEPG
PSPRRLRTRKPRDVVPTSTKQQNKIISEDNQLKTKNFKRQSRNNSSSSEEEELCRKSKKK
CSDKSKTVIKSKRKNEKQDQVSTDDEETDNKLKKRQDIWAEVYVESKASWICINVIDGNV
DCIAEIYKKASKPVLYVIAYNSERLVKDVTRRYCPQWLSVTRKQRIDEKWWIETLSYWQE
RETTMSKQEDELLLQKELEQPLPKTVGECKGHPLYVLVRHLLKYEALYPPDCVPLGHLKT
GEAIYSRYCVYTLCSRETWLKKARVVKPKQDPYKIVKALPKYDKLSGMRLKDSALELFGE
WQTTDYVPPEAKDGIVPRNEYGNVDLFKKCMLPKGTVHIILPGLNRIARKLNIDCATAVV
GFNFGCMGAVPATEGYVVCAEYEDTLREAWETEQIEAAKRAAEKAKKKVYANWRKLIRGL
LIREKLQQKYNFRNESKDQSNKRSKSQNNAVKKSKAQ
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
acaactacgtataagacagccaatctttgttgtattgcattattaaaaaaaatcaatttt
aaaaacaaggcactgcatataacacccagtatgaatgattccgacgatgacagttccgac
agcagcaacgatttcgccggtattacgccaaaagatgaactgacagcgagtttctttgca
ataaaaccggtgacaaagcctaacctagtggattcgaaggacaatagcgaggatgagagc
agcaacgatgagaatttcgcgagtgtacccgagaacaatagcattgaactattctcggaa
gtggtcaagaacctggaagcttcacagagagcttctgtcaatgatgaggaacccaaacaa
cacttttccaagtacgacagtacacaagtcactagaaaagtcaaaacagaaaagaaaaaa
aatatatcggacgagataaacgctgttttgctccaaggggaaagcggaatacatgcattc
tgcaagaatgacgaagacacaaacgacgaagacacgaatgacgacgagaaacaaaaagag
gatgttaaacgtcctgaagattatgctatacctaaggaaggtgtccaaataactttacct
ggtacaagtatgatttttaaaaagaaaacagccaacaaaagggaatcagatctggctgca
cttttgcgaaaaaaattaaaagctaatcagattattgtagaaaaagcagctagactttgt
tggttggcatatggatttcacttaaatcatcaagccaatgaacctgaaataatggcaaca
gcagtctctcttatatcaacaaaaagttatccaaaagataactttaatttagaataccta
gaaaaatttacaaaatggtttaaaaatatatttacaatacagtctactgatgatcaagtt
attataaataaggagacattattaaatagaatcgcagagaggaaaatttacaattacaag
gaattagtaatattatatgtagcaatactaagaggtattggtttacattgtcgtttagta
gtatctctcaatccaccacttgtaaaaacttataatgaattactgcctaaaacaagtaca
gtaaaaaaagatagtaaaattaaagatgaaacaaaaccaaaaaagacatcctcgaaggaa
gataagaaaaatgtgaattcaaagcagcataagaaaaatgtgaattcgaaggaaactaag
aaaaatgtagattcaaagaaagatctcaaaaataacagtataattcagaatgacgagaat
gcacgaagaaatgctaatgaagaagcaaagaaaaaggcagcagagattcttcgctcaaag
tattcttataataagaaaaacaaagataaattaaatagcaatatagccatacaagataat
gcttctacatccaaaagtatagaaacagcttctacaagttcaagaaaagtagagcctggt
ccatctccaaggcgtttaagaactagaaagccacgtgatgttgtacccacttcaactaaa
cagcaaaataaaattatttcagaagataaccaacttaaaacaaaaaatttcaagagacaa
tcacgaaataatagttcaagttccgaagaagaagaactgtgtagaaaatcaaaaaaaaaa
tgtagtgataaaagtaaaacagtcattaaatctaaaagaaagaatgaaaaacaggaccaa
gtgtcgacagatgatgaagaaactgataacaaattaaaaaagagacaagatatatgggcc
gaagtatatgtggaatctaaagcaagttggatatgtataaatgttatagatggaaacgta
gattgtatagctgaaatatacaaaaaagcaagcaagccagtattatatgtgatagcttat
aattcggaaagattagtaaaagatgtcacaagacgctattgtccacagtggctttctgtc
acacgtaaacagcgtattgatgagaaatggtggattgagactttaagttattggcaagaa
agagagacgaccatgtctaaacaagaagatgaattactattgcaaaaggaattggagcaa
ccattacctaaaactgttggcgaatgcaaagggcatccgttatacgttcttgtcaggcat
ttactcaaatatgaagccttgtacccaccagattgtgtaccattaggacatttgaaaaca
ggcgaagctatttattcacggtattgcgtatatacgttatgctcacgagagacgtggcta
aagaaagctcgagtagttaaaccgaaacaggatccttacaaaatagttaaagcacttcca
aaatatgacaagctttcaggtatgagacttaaagactctgcattggaactattcggagaa
tggcagactacagactacgttcccccagaggctaaagatggtattgtacctcgtaatgaa
tatggaaatgtggatttatttaaaaaatgtatgcttccaaaaggcacagtacatataatt
cttccaggattaaatcgaatcgcgcggaaattgaacatagattgcgcgactgctgtagtc
ggtttcaatttcggttgcatgggcgctgtaccagccactgagggctatgtcgtgtgcgct
gaatacgaagacacattacgagaagcttgggaaacggaacaaattgaagcagctaaacga
gccgctgagaaagctaagaaaaaggtttatgccaactggagaaaacttattagaggttta
cttattagggagaaactacagcaaaaatacaattttagaaatgaatctaaagaccagtca
aataaacgttcaaaatcacaaaacaatgccgtaaagaaatccaaagcacaataa
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