Cyphomyrmex costatus: 108771648
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Entry
108771648 CDS
T11118
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108771648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108771648
03016 Transfer RNA biogenesis [BR:
ccoa03016
]
108771648
Enzymes [BR:
ccoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
108771648
Messenger RNA biogenesis [BR:
ccoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
108771648
Transfer RNA biogenesis [BR:
ccoa03016
]
Prokaryotic type
tRNA degradation factors
108771648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
DUF3855
ORC3_ins
DUF892
MAPB1_N
DUF5094
Motif
Other DBs
NCBI-GeneID:
108771648
NCBI-ProteinID:
XP_018392494
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MIARTNFRLLKYCRTVFVTCKYLCNKRNVYYVKFSTASGKKAGTEAVTFSDGKQLQFSTG
KYARFADGCAIATLGDTSVMVTAVCQHQSSISSFLPLVVDYRQKAAAAGRIPTNFLRREL
GPSEHEILTSRVIDRSIRPLFPEGFYFNTQLMCNMLAVDGMNDPDVIAINGASAALSVSD
IPWNGPVGAVRLGMIDNEVIVNPTRRQIQDSILNLIITAAKQNLIIMLEGSANEILEPYL
RKAIKLGVKECQNIVTSITKLQKACGKPKREIKTSGEQEDDNLKSSVKELSERKLQDIFS
NHTHDKISRDNAVNDLRNNIIETLRNDNALLDVKLVEKIFGKIVKDVFRTLILEKNVRCD
GRLPSGIRDISCQVDLFNPLHGSAVFQRGQTQVMCTVTLDSLESALKMDATSMLISSGVK
EKNFFLHYEFPPYATNETGHSTRVGRRELGHGALAEKALRPVLPKDYPFTIRLTSEVLES
NGSSSMATVCGGSLALLDAGIPISSTAAGVAFGLVTKYNETNTHIEDYKILTDILGIEDY
LGDMDFKIAGTKAGFTAFQADIKIPGVPLKIIMECIDKTTNAKSEIIKIMNKVIQAPRQT
KKDKMPVVDNLEIPIHQRGKFLGIGGINLKKIFLETGVHIYPHDENIYSIFAPNEDAMTE
AKEMIEGILKKDREPILEFGAIYTARIVEIRETGVMVTLYSNMIPALLPNSQLDQRKIHH
PSALGLEVGQEIQVKYFGRDPVSGQIRISRKVLQVPTSVAKTLHRDDAEKT
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgatagcacgtacgaattttaggttattgaaatattgtaggacagtatttgtgacatgt
aaatatttgtgtaataaaagaaatgtgtattatgttaagtttagtaccgcaagtggcaag
aaagccggcaccgaagctgtcacgttttctgatggcaagcaacttcagttttctacaggc
aagtatgcacgttttgctgatggctgtgcgattgcaactcttggagacacttctgtcatg
gtcactgcagtttgtcagcatcagtcatctatttcttcgttccttccactcgtcgtggac
tacagacagaaggcagcagcagccggtcgcataccaaccaactttctacgaagagaactt
ggaccaagtgagcatgaaattcttacgagcagggtcattgatcgatccataagaccgtta
tttccagaaggattctactttaacactcagttaatgtgtaacatgttagccgttgacggc
atgaatgatcctgatgtgatcgccattaatggagcttctgcagctcttagtgtttccgat
attccttggaatggtcctgtaggtgctgttagacttggaatgatcgataatgaagtaata
gtcaatcctaccagacgtcaaattcaagacagtatattaaatcttattatcactgcggct
aaacaaaatttaataatcatgttagaaggttcggccaatgagatattggagccatattta
aggaaggcaataaaactgggcgtcaaagaatgccagaacattgtaacatcgataacaaaa
ttgcaaaaggcatgtggtaaaccgaaaagagaaattaaaacttctggggaacaggaagac
gataatctgaagagttctgtgaaagaactctcagagagaaaattgcaagacatattttca
aatcatacgcacgataagatatcgagagataacgcagtaaacgatcttagaaataatatt
attgaaacattgcgaaatgataatgcacttttggatgttaaattagtagaaaaaatcttt
gggaaaattgttaaagatgtattcaggacgttaattttagagaagaatgttaggtgtgat
ggacgtttaccaagtggtatacgtgatatatcatgtcaagtagatctctttaatcctctt
catggttcggctgtatttcaaaggggtcaaactcaggtcatgtgcactgtgactttggat
tctttggaaagtgcacttaaaatggatgctacttcaatgttaattagcagtggtgttaag
gaaaagaacttctttctccattacgaatttccaccttacgcgactaatgaaacgggacac
tcgactcgagttggtcgccgagaactgggacatggcgctttggcagagaaagccttgcga
ccagttcttccaaaggattatcccttcaccataagactgactagtgaagttctagaatcc
aatggttcctcttcaatggctaccgtttgcggcggaagtttggcactgctcgatgcaggt
ataccaatatcttcgacagcagctggcgttgcttttggtcttgtgactaaatataatgaa
accaatacacatattgaagactacaaaatattgaccgatatattgggaattgaggattat
cttggagatatggattttaaaatagcaggcaccaaagcaggattcaccgcatttcaagct
gatataaagataccaggagttccgttaaaaatcataatggaatgtatagataaaacaaca
aatgctaaatcagaaataatcaagatcatgaataaagtgatacaagcaccgcgacaaact
aaaaaggacaaaatgccagtggttgataacttagaaattcctattcatcaaagaggaaag
ttccttggaattggaggaataaacctaaagaaaatatttttggaaactggagtgcacata
tatccgcatgacgaaaacatttactcaatatttgcgcccaacgaagacgctatgacggag
gcaaaagaaatgatagaaggtattttaaaaaaggatcgtgagccgattttggagttcggt
gctatttatactgcaagaatagtagaaattcgggaaactggggttatggtgacgttatat
tccaatatgataccggcattattacctaattcccagttggatcaacgtaagattcatcat
cctagtgctctaggacttgaagttggtcaagagatacaagttaaatatttcggacgagat
ccagtgtccggacaaataagaatatcacgaaaagtactgcaagtaccaacttcggttgca
aaaactttacatcgcgatgatgcagaaaaaacgtga
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