Cyphomyrmex costatus: 108771787
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Entry
108771787 CDS
T11118
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108771787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccoa03041
]
108771787
Spliceosome [BR:
ccoa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108771787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
108771787
NCBI-ProteinID:
XP_018392653
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MSLADELLADLEENDDADAFMEEPEPQFIPTSVSKVLEEEIKVSSVRELAQLRDSEQLQQ
VMLQIEKHSKIPRKSTDIVGPVESDPEYQLIVEANNMAVKIDNEIAIIHRFTRDKYSKRF
PELESLVVGPLEYVMTVKELGNDLDRAKNNEILQQFLTQATIMVVSVTASTTQGQLLTEE
EREAICEACDMAVELNNCKSKIFEYVESRMAFIAPNLSIIVGASTAAKIMGVAGGLTKLS
KMPACNLLVLGSQKTTLSGFSQVATLPHTGFIYYSEIVQETPPDLRRKAARLVASKSMLA
ARVDSCHESTDGHIGQMLREEIEKKLDKLQEPPPVKFVKPLPKPIDPGRKKRGGKRVRKM
KERYAITEFRKHANRMNFADIESDAYQEDLGYSRGTIGKAGTGRIRLPQIDEKTKVRISK
TLQKNLQKQQQWGGSTTVKKQVSGTASSVAFTPLQGLEIVNPQAAEKKVNEANAKYFSNT
AGFLKVKKT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagctgatgaacttcttgctgatcttgaggaaaatgacgatgcggatgctttt
atggaggagccggaaccacaatttattccgacttcagtttctaaagtcttagaagaagag
ataaaggtgtcctctgttcgagagttggcccagttacgagattcagaacagttgcagcaa
gttatgttacagattgaaaagcatagtaaaatacctaggaagtcaactgatattgtagga
cctgtggaatctgatccagaatatcagttaatagttgaagctaataatatggcagtaaaa
attgacaatgaaattgctattatacacagatttacaagagacaaatactcgaaaagattt
ccagaattagaatccttagttgtaggaccattggaatacgtaatgactgttaaggaattg
ggcaatgacctggacagagccaaaaacaatgagattctacaacagtttcttactcaagct
acaatcatggttgtttctgtgactgcatcaaccactcaaggtcagttgttgacagaagag
gagagagaagctatttgtgaagcttgcgatatggcagtggaattaaacaattgtaaatca
aagatatttgagtatgtagaaagcagaatggcatttattgcaccaaatttatcgataatc
gttggtgcatccacagctgccaagattatgggtgttgcaggtggtctgacaaagctttct
aaaatgccagcttgtaatcttctagtccttggatcccagaagaccacattatctggattt
tcacaagttgccaccttgcctcatacgggttttatatattactctgaaattgtacaagaa
actcctcccgatctacgaagaaaagctgcaagactagtggcatcgaaaagtatgttagct
gctagagtagactcttgtcatgaaagtactgatggtcacattggacagatgctgcgcgaa
gagattgagaagaaactagacaagctacaagaaccaccacctgtaaaatttgtgaagcca
ctaccaaaacctattgatcctggtcgaaagaagcgcggtggcaaacgcgttcgtaagatg
aaggaacgttacgcgattacagaattcaggaagcacgcaaacaggatgaactttgcagat
attgaaagtgacgcctaccaagaagatcttggctattcaagagggacgattggtaaggct
ggcactggtcgaatcagactgccgcagattgacgagaagacaaaagttagaatatccaag
acactccagaaaaatctacagaagcagcagcaatggggaggtagcaccaccgttaagaaa
caagtctcaggaactgcttccagtgtggcttttactcctttacaaggtcttgaaatcgtc
aatccgcaagctgcagagaaaaaagtgaacgaggcaaatgcaaagtacttttccaataca
gctggtttcctaaaagtcaagaaaacgtaa
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