Cyphomyrmex costatus: 108771823
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Entry
108771823 CDS
T11118
Name
(RefSeq) X-ray repair cross-complementing protein 5-like
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
108771823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccoa03400
]
108771823
DNA repair and recombination proteins [BR:
ccoa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
108771823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_C
Ku_N
Motif
Other DBs
NCBI-GeneID:
108771823
NCBI-ProteinID:
XP_018392695
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MPPKSLKESITFVINVGIVQHGTQNNSQLLDNEKFILKHIIQKKIFLRPKDEIGVILMGS
DGSKSDSITGLDTAQELCTMQFGNWDLIKSIEKLQPTNQICSWMDAIYAAVEYIKHECID
KCERKIILMSCFNEEEDVVGEFQAEDITQMLNSEEISVIAIGERALHDIDEDLQTPSETL
LMKILEQINGQYLTFKHAMSDVRFYKRPSTKPHPWNCVMELGEVHIPIVGISKMPTEVKL
PEMILMAKTSTSNTPDKEVPIKNVAQWMDNNRTTHTEEDIIRGYVYGGKAIPVSDEAKKA
MTPKNNEKCYKIHGFTMRENIPMEYWLSDGSYVIMPANEIASTPFYSLVQAMVEKNVVAI
VEKVYRANAEANMMALFPSVDLENEPWCLIEIGLPFERDYGAISQKPLKSVMNQLSQEQN
DVMDDLLRSLELPDATDDDITANSDKYLPGYMPDPGTQHVWDVLAARALNPDKPLPLIAD
DLLNLLEQPEFIKTKCKPVTERIQNLFFLEKKKPLKRRKRSQEDDNKQSDNNDASMTQTV
KEKEKDIGNNDILDDISDLCNFDFDDLVDT
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgaaatcattaaaggagagtataacttttgtgataaatgttggaatcgtccaa
catgggacacagaataattcacaactgttggacaatgagaagtttattcttaaacatatt
attcaaaagaagatatttctacgtcctaaggatgaaataggagtgatattgatgggctca
gatggtagtaaaagcgacagtattacaggattagatactgcacaagaactatgtaccatg
caatttggaaattgggatttgataaaaagcatcgagaaactgcaacccacaaatcaaatt
tgttcttggatggatgcaatttatgctgcagttgaatatattaaacatgaatgcatagat
aagtgtgaaaggaaaataatcctaatgtcttgtttcaacgaagaggaagatgttgttggc
gaatttcaggcagaggatataacacagatgttaaattcagaagaaatttcagttatagca
attggagagagagcattacatgatatagatgaagatttgcaaacacctagtgaaacatta
cttatgaaaattttagaacagattaatggtcagtatctcacttttaaacatgctatgtca
gatgtgcgcttctacaaacgaccatctactaaaccgcatccgtggaactgcgtgatggaa
ttgggtgaagttcacattccgatcgttggaatttctaaaatgccgacggaggtaaagtta
ccggaaatgatattgatggctaagacaagtacatccaatacacctgataaagaagtgcca
attaagaatgtcgcacaatggatggacaacaataggaccactcacacagaagaagatatt
atccgtggttatgtgtatggtggcaaagctattcctgtttcagatgaagctaagaaagct
atgactcccaaaaacaatgagaaatgttataagattcatggttttacaatgagagaaaat
attcctatggaatattggctgtcggatggctcttacgttattatgcctgctaacgagata
gcgagtacgccgttttatagtttagtgcaagccatggttgagaaaaatgttgtcgcaata
gtagagaaggtttatagagcgaatgccgaagcaaacatgatggcactgtttccaagtgtt
gacttagagaatgaaccatggtgtcttattgagatcggtttaccatttgagcgagattat
ggagcaatatcgcagaaaccattgaaaagcgtgatgaaccaactgtcgcaggaacagaat
gacgtaatggatgatctattaagatccttagaattgcccgatgctaccgatgatgacata
accgccaatagtgacaaatatttaccgggatatatgccagatcctggaacgcaacatgtg
tgggatgtattagcagctcgcgcgcttaatccagataaaccgttgccgcttatcgccgat
gatctattaaatcttttagagcaacccgaattcataaaaacaaaatgcaaaccagtgacc
gaaagaatacaaaatttgtttttcttagagaaaaagaagcctcttaagaggcgtaaaaga
tcacaagaagatgataataaacaatcagataataatgatgcgtctatgacacagacagtt
aaagaaaaggaaaaagatatcggtaacaatgatatattagatgatatttctgatttgtgt
aatttcgattttgatgatcttgttgatacgtag
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