Cyphomyrmex costatus: 108772025
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Entry
108772025 CDS
T11118
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa04080
Neuroactive ligand-receptor interaction
ccoa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108772025
04082 Neuroactive ligand signaling
108772025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccoa04040
]
108772025
Ion channels [BR:
ccoa04040
]
Ligand-gated channels
GABA-A
108772025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
108772025
NCBI-ProteinID:
XP_018392973
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MTTMGSFHTISGSFLLLVAIVVLLPATHHTPFAYAASAGGSMLGDVNISAILDSFSVSYD
KRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDPRLAFKPRPGVETLS
VGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITASCPMNLQY
FPMDRQLCHIEIESFGYTMRDIRYKWNSGLQSVGISNEVELPQFRVLGHRQRQTTIHLST
VGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVR
SMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKIS
YVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKNRFQKIAESMKAASENPGPPRVP
GDHGDHAPKQTEVRFKVHDPKAHSKGGTLENTINGRADEESAGAPQHIIHPSKDITKLYG
ITPSDIDKYSRIVFPVCFVCFNLMYWIIYLHISDVVADDLVLLEEAK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccatggggtccttccacaccatctccgggagcttccttctcctcgtggccatc
gtcgtcctactgcccgccacgcatcacacaccgtttgcatacgccgcaagtgccggcggc
agtatgctgggcgacgtgaacatctctgcgatactggattccttctccgtcagttacgat
aaaagagtaaggccgaactacggaggtccgcccgtggaagtcggcgtcaccatgtatgtc
ctcagcatcagctccgtatccgaggtgttgatggacttcacgttggatttttacttccga
caattctggacggacccacgactcgcgttcaagccgcgaccaggcgtcgagacgctcagc
gtcggttcagaatttatcaagaacatttgggtacccgacaccttctttgtcaacgagaag
cagtcgtactttcacatcgctaccaccagcaacgagttcattcgcattcatcactcgggg
agcattacgcgtagcatacgcttaacaattacagcgtcgtgtcccatgaacttgcaatat
ttcccgatggaccggcaactgtgtcatatcgagatcgagagctttggatacacaatgcgc
gatattcggtacaaatggaactccggcctacagtcggtcggcatctcgaacgaggtggaa
ctaccgcagtttcgcgtgctcggtcacaggcaacgacagacaaccatacacctatctaca
gtcggatacacgatgagggacatccggtacaagtggaacgagggcccgaacagcgtcggg
gtcagcaacgaggtctccctgcctcagttcaaggtcctcggtcatcgtcaacgtgccatg
gagattagtcttaccaccgggaattactcgcggctggcctgcgagatccagttcgtacgg
tcgatgggctactacctgatccagatctacataccctcagggctgattgtcataatatcg
tgggtgagcttttggctaaaccgaaacgcgacccccgctcgggtggccctcggagtaacc
actgtgctcactatgacgaccctaatgtcctcgacgaacgcggcgctaccaaagatctcc
tacgtcaagtccatcgacgtctatctgggcacctgcttcgtcatggtctttgcctcgttg
ctcgagtacgccacggtgggctacatggcgaagaggattcagatgcggaagaatcggttc
caaaagatagccgagagcatgaaggcggcgagcgaaaatccaggaccgccgcgcgtgccc
ggcgatcatggcgatcatgcgcctaagcaaactgaggtgcggttcaaggtgcacgaccca
aaggcacacagcaaaggtgggacgctcgagaacaccataaatggtcgcgccgatgaggaa
tcggcgggcgcgccgcaacatattattcatcctagcaaggacatcaccaagctctacggc
ataacgccgtcggacatcgacaaatactcccgcatcgtattcccggtatgtttcgtttgc
ttcaatctgatgtattggatcatttacctccacatcagcgacgtggtcgcggatgacctc
gtgctgctcgaggaggccaagtaa
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