KEGG   Cyphomyrmex costatus: 108772158
Entry
108772158         CDS       T11118                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108772158
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccoa04131]
    108772158
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccoa04147]
    108772158
Membrane trafficking [BR:ccoa04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    108772158
Exosome [BR:ccoa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108772158
  Exosomal proteins of other body fluids (saliva and urine)
   108772158
  Exosomal proteins of colorectal cancer cells
   108772158
  Exosomal proteins of bladder cancer cells
   108772158
SSDB
Motif
Pfam: VPS28 DAHL SUKH_6 SAM_CEP-1_C
Other DBs
NCBI-GeneID: 108772158
NCBI-ProteinID: XP_018393143
LinkDB
Position
Unknown
AA seq 212 aa
MSVTQDRPELYEEVKLYKNAREREKHDNQADLYAVVNTLQHLEKAYIRDCVTPKEYTAAC
SKLLVQYRAAFKQVQSDQFPTIDLFTRAFRLDCPAALERIKEDRPITIKDDKGNTSKCIA
DIVSLFITLMDKLRLEIKAMDQLHPDLRDLMDTMNRLSILPSDFDGKEKVSEWLQTLDNM
SASDELSDTQVRQLIFDLETSYNAFNKILHNS
NT seq 639 nt   +upstreamnt  +downstreamnt
atgtcggttactcaggatcgtcccgagttatatgaagaagttaagctgtataaaaatgcc
cgagaaagggagaagcatgataatcaggcagatctgtatgccgtagtaaatacattgcaa
catttggaaaaggcttatatcagagactgcgttacgccaaaggaatacactgcagcatgt
agtaaattgttagtgcaatacagagcagcttttaagcaggtacagagcgatcaatttcca
acaatcgacctcttcaccagagcattccgtttagattgtcctgctgctctcgaaagaatc
aaggaagacagaccgatcacgattaaagacgataaaggcaacacttctaagtgcattgcc
gacattgtttcgttgtttattactcttatggataaattacgactggaaatcaaagccatg
gatcaactacatccagatttaagagatctcatggataccatgaatcgtctcagtatatta
cccagtgactttgatggcaaagagaaagtttcagaatggttacagacacttgacaatatg
tccgcctcggacgaattatcagatactcaagttagacaattgatatttgatttagagaca
tcctacaatgcttttaataaaatacttcataattcttaa

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