Cyphomyrmex costatus: 108772518 Help Entry 108772518         CDS       T11118                                  Name (RefSeq) gem-associated protein 5   KO K13133   gem associated protein 5 Organism ccoa  Cyphomyrmex costatus Brite KEGG Orthology (KO) [BR:ccoa00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccoa03019]     108772518    03041 Spliceosome [BR:ccoa03041]     108772518 Messenger RNA biogenesis [BR:ccoa03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      108772518    mRNA cycle factors     P-body specific factors      108772518 Spliceosome [BR:ccoa03041]  Other splicing related proteins   Proteins involved in snRNP biogenesis    SMN complex factors     108772518 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TPR_GEMI5 Beta-prop_RIG_2nd WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 Beta-prop_EML_2 Beta-prop_WDR5 Beta-prop_CAF1B_HIR1 WD40_Prp19 Beta-prop_WDR36-Utp21_1st EIF3I WD40_WDHD1_1st Beta-prop_Aladin Beta-prop_HPS5 Beta-prop_EML Beta-prop_TEP1_2nd WD40_Gbeta NBCH_WD40 Beta-prop_TEP1_C Motif Other DBs NCBI-GeneID:  108772518 NCBI-ProteinID:  XP_018393558 UniProt:  A0A151IR38 LinkDB All DBs Position Unknown AA seq 1320 aa AA seqDB search MNEVTLPPSPNWYLSNVLACSKRGTVAWGARNFIVIAKPKEDNVMQYSIIKDYFKDKVTA LAFCPKLDDPDSPELLICSGDDAKARVWNVDTLELVAEFAFVDGSKLIVGVDWSVKDCNL ACAVNLEGSLMYCNIQYKTSKIVSLGKLTATCLACCPHDSSLVAIGTKSGLIYIVQKDTI LYRMRGHNEDIVSLSWCPSDMNVLNGGDKRDLLLASGARDRSVFIWRAGRDGRYETVLNI PNMPIMTVPHKSKLNTTNGTWIAVCWAKPNLLLTSSLWGELLSWELSANKEKPKCKLFHT FHNRGLFSIAAALNYDATFDDSKTDSELRVWSLAQDRWVICCKSNNDPTKPAILEYKIPT QGGFVYCMSACPIDTSRIAFGVGDAMLRLWNLSEPHTTTFDIILHWQKIKGKIRVVSWFP EDESTVAFGTGEGRVGVFEAIETNKQPVLYRQYHRNTIYKLEWAQLKSEYFLFSCAEGEL IAYKKAAPSDEPISIIKEGCLEFSWKSNICLAVALENGSIMFYDQKLRKRGNSIHILRNV VNCLAWHPESTMADKWMSPIANYLAVASDSCSIMIFDMSKLIKELEATGMKDVIENDQER TMHKIVATLNGHSDKVVCLAWSPHFSGHLVSGSYDNIAQVWNVEKQELMGTYIGHDGPVL CCMWSPLKPQLIMTGSSDFTLHIWNYTLSAQSPKQSSDIKASKKKQKQQKKTTKNKTDDE KNSTALTNLVNQSSIEVTTPKLKVSQSKKKDRKSYFNKYNKLINDKSQILNFIKHDIRNN QTKENSSENASENLSLFCEKKDDFLTFISNEKLTHDNSDIVTELNMWCDDLKNNLICATR DKQLNDFLVSLASSISTKMWRDTCEAYAHQLILQHNPEKAVSYLLAIHKIHEAIDVFVNA KMFKEAYALARCKLDDDDMFLNKILESWAEWATFKGHMEQAAHCYVKLGYFDKAAKVLSH RKDLHCLEVASELAFLNGDEGFGTSLAVDAMTRALMKSEWSKARSLITDIRQVQYLNVHI DAHEIIMSTFLEHTEFDIMKMWLEGKENNGILQILEEKYGTCYYNLLQKKDDTNIILGNV TNDKVVQINVSYQIAMAATCDAKEIRLKYLTTALGNMFEFENKVEYETMMKEGFFTRVLT KLDTKKQTDEDSIYAKSDYPVSQSIRAYLCIGLLNWLLKYLEKLSVEEEIQFTQLVLDLI DDAVNETNLSHQSKISKYNQLEDQLMALAISPAVEIRDKIENGDEYRNTEEEAEKLKLDV NKFIEDRVNIPDPNIVLQKAGFVANKIKDDNNKLQLLQFLDKFVEIKTPQEHSQLENISL NT seq 3963 nt NT seq  +upstreamnt  +downstreamnt atgaatgaagttacattgcctccttcgccaaattggtatttgagcaatgtccttgcttgc tctaaacgtggaactgtggcatggggtgcgagaaacttcatcgtcattgccaagccaaaa gaagataatgttatgcagtattctataattaaggattattttaaagacaaagtaactgca ttagcattttgccctaagcttgatgatccagacagtccagagttattaatctgtagtggt gatgatgccaaagctagagtttggaatgttgatacgttggagttggtagcagaattcgcg tttgtcgatggaagcaaattgattgtaggagttgactggtcagtcaaagattgcaatctt gcgtgtgcagtgaatttagagggttctttaatgtactgtaatatacagtataagacttcg aaaatagtatctctaggcaagctaactgctacatgtttagcttgctgtcctcatgactct agtcttgtagcaataggtactaaaagcggattaatttatattgttcaaaaggatacaata ttgtatagaatgagaggacacaatgaggacatagttagtttatcttggtgtccttcagac atgaatgtgttaaatggaggagataagagagatttacttttagcttctggtgcaagagat agatctgtatttatttggagagccggtagagatggtagatatgagactgtactaaacata ccaaatatgcctatcatgactgtcccacataaaagcaaactcaacactacgaatggaacc tggattgcagtatgttgggcaaagcccaatttgcttctaactagctccctttggggcgaa cttctttcttgggaactttcagcaaacaaagaaaagcctaagtgtaaattgttccataca tttcataatagaggattattttcgatagctgctgcacttaattacgacgcaacatttgat gattcgaaaacagattccgagcttagggtctggtctttagcacaagatcgctgggttata tgttgcaaatctaacaacgatcctacgaaaccggcgatcctggagtacaagattcctaca caaggaggattcgtctattgtatgagcgcttgtcctattgatacctcacgcattgcattt ggcgtaggagatgcaatgctgcgtttatggaacttgtctgaaccacacacaacaactttt gacattattttgcactggcagaaaataaagggaaaaataagagtggtttcgtggttcccg gaagacgaatctactgttgcttttggtactggagagggtcgcgttggtgtgtttgaggca attgaaactaacaaacaacctgtattgtacaggcagtatcaccgaaataccatttataaa cttgaatgggcacaacttaaatcagaatattttttgttttcttgtgcagaaggagaatta atagcttacaaaaaagctgcacctagcgatgaacctatatctataataaaagaaggatgt ttggaattttcatggaaatccaatatatgcttagcagttgcgttagaaaatgggtcaatt atgttctacgatcagaaactgagaaaacgtggcaactcgatacacattttaagaaatgtg gtgaattgtttggcatggcatcctgaaagtacaatggcagataaatggatgtcaccgatt gctaactatttggcagttgcatctgattcgtgtagcataatgatttttgatatgtccaag ttaataaaggaattagaagcgacaggtatgaaggacgtcatagaaaacgatcaggaacgc acgatgcacaagatagtagcaacattaaatggacactccgataaagtggtgtgcttagct tggagtccgcatttcagtgggcatttagtgtctggtagctacgataatatcgcacaggtg tggaatgttgaaaaacaggagttgatgggcacgtacataggtcacgatggacctgtgctt tgctgtatgtggagtcctctcaagccacagttaataatgactggctcgtcagactttaca ctacacatatggaattatactctatcagcgcaatcgccgaagcaatcttctgacattaaa gcttcgaagaaaaaacaaaaacaacagaaaaaaacaacgaaaaataaaacggatgatgaa aaaaattcaactgcattaacaaatcttgttaatcaatcatctattgaagtaactacccca aaacttaaagtatcacaatcgaaaaagaaagatagaaaatcatactttaataaatataac aaattaataaacgataaatctcaaattttaaatttcatcaagcatgatataagaaataac caaaccaaagaaaactcttctgaaaacgcgtctgaaaacttatctttgttttgcgaaaaa aaagatgattttttgacatttatttctaacgaaaagttaacacatgacaattcagacatt gttactgagttgaatatgtggtgtgatgatttgaaaaacaatctaatttgtgcaactagg gataaacaattaaatgactttttggtatcgctggcatctagtatttccacgaaaatgtgg agagatacatgtgaggcgtatgcgcatcaattaatactgcaacacaatccggaaaaagcg gtgtcatatttactagctatacataaaattcacgaagccatagatgtatttgtaaatgct aagatgtttaaggaggcttatgcactcgcgagatgtaaactggatgatgacgatatgttt ttaaataaaatattagaatcctgggcagaatgggccacttttaaaggtcatatggagcag gcagctcattgttacgtaaaattaggatactttgacaaggcagcaaaggttctgtctcat cgaaaagatttacattgtttggaggtagcgtcagaattagcgtttttaaacggcgatgag ggatttggtacgtctttggcagtagacgcaatgacgcgcgctctcatgaagtcagaatgg tcgaaagcgcgttcccttatcacagacatccgacaagttcagtatctaaacgtacatata gatgctcatgagataatcatgagcacattcctagaacatactgagtttgatataatgaag atgtggttggaaggcaaggaaaataatggtattctacaaatacttgaggaaaaatatggc acttgttactacaatctcttacaaaagaaagatgataccaacattattttgggaaatgta acaaatgataaagtggtgcaaataaatgttagttatcaaattgccatggcggccacgtgc gatgcaaaagagatccgattaaaatatttaacaacggcattaggtaatatgttcgaattt gaaaataaagtggaatacgaaacaatgatgaaagagggattcttcacacgtgttctcacg aaattggatactaaaaagcaaacggacgaggatagtatttatgcaaaaagcgattatcct gtatcgcagagtatacgcgcttatttatgtatcggtcttctgaattggttattgaaatat ttagaaaagctatcagttgaagaagaaatacagtttacgcaattggtattagatttgata gacgatgccgtaaacgaaacaaatttatctcatcagagtaagatttctaaatataatcaa ttggaggatcaacttatggctcttgccataagtcctgcggtggagataagggataaaatc gaaaatggcgatgaatataggaatactgaggaagaagcagagaaactcaaacttgatgta aataaattcattgaagatcgagttaacataccggatcctaacatcgttctccagaaagct ggttttgttgctaacaaaatcaaagatgataataataaattacaacttttacaattttta gataaatttgtagaaataaaaacgccacaagaacattcacaattggaaaatatttcatta tga

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