Cyphomyrmex costatus: 108772560
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Entry
108772560 CDS
T11118
Name
(RefSeq) DNA polymerase beta-like isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108772560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccoa03400
]
108772560
Enzymes [BR:
ccoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108772560
DNA repair and recombination proteins [BR:
ccoa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
108772560
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
108772560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
NTP_transf_2
HHH_3
Cdd1
DUF4332
HHH_RS2-RL21-YNQ2
HHH_2
CCDC50_N
DUF6932
DsrD
Motif
Other DBs
NCBI-GeneID:
108772560
NCBI-ProteinID:
XP_018393617
UniProt:
A0A195CV84
LinkDB
All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MGKRKTTGNANNPNQDLCDFLMELADYERNVSKNVYKYNAYRKAAGTLSALTERVKNGEE
AKKLPGIGVKIAKKIDEFLQTGKLQKLEDIKKDDTNVAISLLARVSGIGPAKAKELVDAG
IKTLEDLKKHQDKLTYHQKLGLKYFEDFEKKIPRAEIVQIEKILKNTINELNSAYLVTIC
GSYRRGKEESGDIDVLVTHPDYTSKADKKKKTISLKTIVECLKKKKLITDTISLGYTKFM
GVCQLPEDKSKPFRRLDIRLTFYDQYYCAILYFTGSDLFNKNMRAHALVKKYTLNEYALK
RLTTEGVPGEIEEITSEEDIFKFLGLPYKDPKDRDI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaggaagacgacaggcaatgcaaacaatccaaatcaggacctgtgtgatttt
ttgatggaactggcagattacgaacgtaatgtcagcaagaatgtttacaagtacaatgca
tatcgcaaagcagctggaacattaagtgctctgactgagagagttaagaatggagaagag
gcgaaaaaattacctggaataggagtaaaaattgcaaagaagatagatgaatttcttcag
actggaaaattgcaaaagctagaagatatcaagaaggatgatactaatgttgccattagt
ctattggctcgggtgtctggcataggtcctgccaaggcaaaggaattagtggacgctggt
atcaagactttggaagatcttaagaaacatcaagacaagctcacatatcatcagaaacta
ggattgaagtattttgaagactttgagaagaaaataccaagagcagaaattgtacaaata
gagaagatattgaaaaataccatcaatgagctaaacagtgcttacctcgtaactatctgt
gggagttacagacgtggcaaagaggaaagtggagatattgatgttcttgtaactcatcct
gattatacgtcaaaagcagataagaaaaagaaaactatatcattgaaaactattgtggag
tgtcttaaaaagaaaaaactgattacagatacaatatctcttggctatactaaatttatg
ggagtatgtcagttaccagaggataaaagcaagccttttagacgattagacatacgtctt
acattttacgatcaatattattgcgccatactttatttcacaggaagtgacttgttcaac
aagaatatgagagctcatgcattggtaaagaaatacactttaaatgaatatgcactgaag
cgtcttacaaccgaaggcgttccgggagaaatcgaagaaattacatctgaagaagacatt
ttcaaattcctaggtttaccttataaagatccaaaagacagagatatctaa
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