KEGG   Cyphomyrmex costatus: 108772697
Entry
108772697         CDS       T11118                                 
Name
(RefSeq) nucleoporin Nup37
  KO
K14302  nuclear pore complex protein Nup37
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108772697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccoa03019]
    108772697
   03036 Chromosome and associated proteins [BR:ccoa03036]
    108772697
Messenger RNA biogenesis [BR:ccoa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     108772697
Chromosome and associated proteins [BR:ccoa03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    108772697
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40_RFWD3 ANAPC4_WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_EML Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st TAF1C_beta-prop Beta-prop_Nup120_160 Acetyltransf_5 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 108772697
NCBI-ProteinID: XP_018393794
LinkDB
Position
Unknown
AA seq 322 aa
MDEAVTTPPTFKRSFLERIYCVEFSPYEWSQHLICIALAKEIVVGTVRFQDEDDAVEDMT
YSPIRTFHHDARPHAIAWSPETSLSIVPKIVTFCIAGSDFKIRLYNSNLNDVNMFEILEG
HKDYMNAISYEPEGELLASVSDDHTCKLWAVKENQKCVSTFYLTSPGTSVCWHNEESGKL
LVAEKNGLIRMYNVRSQQAIMSLDSGAVPLTAADWGPNPLKVASIAAGELLLWDVSRPSR
PLDERTLHVEGGLTVKISHANENLVSSIGWPDNLLKVVNLKSKVVVLCGKVKLIGGMTWH
YKLPYVCAGSDRELCFWRINVN
NT seq 969 nt   +upstreamnt  +downstreamnt
atggacgaagcagtcaccacgccgcctacatttaaacggagtttcttagagcggatttat
tgtgtcgagttttcgccgtacgagtggtcgcagcacttgatttgcatcgccctcgccaaa
gagatcgtcgtcggtactgtcagatttcaggatgaagatgatgctgtggaagatatgaca
tatagtcctattagaacatttcaccatgatgccagacctcatgcgattgcttggagtcca
gaaacctccctaagtattgtccccaaaattgtcacattttgcattgctggatcagatttc
aaaataagattgtataatagcaatctgaatgatgtcaatatgtttgagattttagaaggt
cacaaagattatatgaacgcaatttcgtatgaaccagagggtgaactattggcatcagtt
tccgacgatcatacatgtaagttatgggcagttaaagagaaccaaaagtgtgtgtctaca
ttttacttaacgtcacctggtactagcgtatgttggcataatgaagagtctggcaagctc
ttagtagcggaaaagaatggtttaatacgtatgtataacgtcagaagtcagcaagcaatt
atgtccctcgattcaggggctgttcccttgactgcagctgactggggacccaatccctta
aaagttgcatcgatagctgctggagaattgctactttgggacgtgtctagacctagtcgt
cctcttgatgagcggacacttcatgtggaaggtggtttaacagtaaaaatctcacatgcg
aatgaaaatctggtatcaagtatcggatggccagataatttattgaaggttgttaattta
aaatcgaaagtagtagtattatgtggaaaggtaaaattaattggcggtatgacatggcat
tataaattaccatatgtctgtgctggaagtgacagagaattatgtttctggagaataaat
gtaaattag

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