Cyphomyrmex costatus: 108772711
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Entry
108772711 CDS
T11118
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108772711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108772711
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108772711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
HBS1_N
MMR_HSR1
AAA_22
Dynamin_N
Ras
Motif
Other DBs
NCBI-GeneID:
108772711
NCBI-ProteinID:
XP_018393809
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MSRHRDVRSMNYSDEYDGYDDVYGHSMEDDYCVSPSVEQFLFDRSKQQNIASFITEPDIV
EDNEDIDESSPSSKEESFNLSELEKAKLISCLEIIRNVIGDTVSDSKLKDKIILSNFDAN
IALDSILKESSPKEVTDSMENKKQLERHPGSKISSKPTLQVTTPSTVKVVPTGTKPIVKG
FDLSGVENTDLLSPRCGSPSSNRNSPEVKRKEDIIQKDKRIVSSKMNSPRCQSPISGHVT
PELDTKVKSNASTNEEKVDVEAIYNSKRGSSKEQLHLVVVGHVDAGKSTLLGRLLCDLGQ
VPQRLIHKYQQESKKIGKQSFAYAWVLDETGEERERGITMDIGHSKFETDTKSITLLDAP
GHKDFIPNMITGATQADVALLVVDATRGEFETGFDSGGQTREHALLLRSLGVSQLAVVVN
KLDTVNWSKDRFNEIVDKMSVFLKQAGFKDTVTFVPCSGLSGENIVTKLKEQLSNWYTGP
TLVSVIDNFKCPERPINKPFRFSVNDIFKGTGSGFCVSGHVETGMVSLGDKVLVLPQNEI
AVIKGLQSDEVSTTNAFAGDHVALTLAGIEQQNVGIGDIICNQQNPVPVTTCFQAHVVIF
AIAKPITKGLPVVMHQQSLVQPAVIVKLIAQLHRSTGDVIKKKPRCLSKNSSAIIEVATQ
TPVCMELYKDIKQLGRVMLRLEGTTIAAGLITKIL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacaccgagacgttcgttctatgaattactctgatgaatatgatggctatgat
gacgtatatggacattcaatggaggacgattattgcgtatcacctagtgtggagcaattt
ttatttgatcgaagcaagcaacaaaatattgcttcattcatcactgaacctgatatagta
gaagataatgaagatattgatgagtcttcaccatcgtccaaagaagaaagctttaatctt
tctgaattggaaaaggcaaaattaatatcttgtttggaaataattagaaacgtcataggt
gacacagtatctgattctaaattgaaagacaaaatcattctgtcaaattttgatgcaaat
atagcacttgattctattttaaaggagtcttcgccgaaagaagttactgattctatggag
aataagaaacaattggagcgacatccaggtagcaaaatatcatcaaaacctacattgcaa
gtgacaacaccatctactgtaaaggtcgtaccaactgggacaaaacctattgtgaaaggt
tttgatttaagtggtgtcgaaaacacagatttgttgagcccacgttgtggaagtccgtct
tccaatcggaatagtcctgaggtcaaacgtaaagaggatatcatacaaaaggacaaaaga
atagtttcatcaaaaatgaatagtccaagatgccagtcacccatatcaggtcacgtaaca
ccggaattagatacgaaagtaaaatctaatgcatctactaatgaagaaaaagtggatgtc
gaagcaatatacaacagtaaaagaggcagtagcaaggaacagcttcacttggtagtggtg
ggacacgttgatgctggaaaaagcacattacttggacggttactctgcgatttgggtcaa
gtaccacagagacttattcataaatatcaacaagagagcaaaaaaataggaaaacagtca
tttgcttatgcttgggtactcgatgaaactggcgaagaaagagagcggggaataacaatg
gatataggccactcgaagttcgaaacggacacaaaatctatcactctgctggatgcacct
ggtcacaaggattttattccaaatatgataaccggtgctacacaagcagatgtagctttg
ttagtagtcgatgcaactagaggcgagtttgaaaccggatttgatagtggagggcagaca
cgcgaacacgctctattactacgctctttaggagtatcgcaattagcagtagttgttaac
aagttggataccgtaaattggtctaaagatagattcaatgagatagtggacaaaatgagt
gtattcctaaagcaagctggcttcaaagatactgtcacttttgtaccttgtagcggttta
tctggagagaatattgtaacaaaattaaaggagcaactctctaattggtatactggacct
actttagttagcgttatcgataatttcaagtgtccagagcgacctataaataaaccattc
cgtttttcggtgaacgatatatttaagggtactggatctggattctgtgtgtctggtcat
gttgaaacgggtatggtatccttgggtgataaggttttagtattaccccaaaatgagatt
gcagttattaaaggtcttcagtcggatgaagtttcaacgacaaatgcgtttgctggtgat
cacgttgcattgacattagcgggaatcgagcagcaaaatgtgggtatcggcgatatcatc
tgtaaccagcagaatccagtacctgtaacgacctgctttcaagcacacgttgttatattt
gcgatagcaaagccaattacaaaagggcttccagtagtgatgcaccaacaatctttggta
caaccggcggttattgtaaaattaatagcgcaacttcatcgaagtactggtgacgtaatc
aagaagaaaccacgttgcttgtctaaaaattctagtgcgatcattgaggtcgctacgcag
acaccagtttgcatggagttgtataaggatattaaacagttaggtagagttatgttacga
ttagaaggtaccaccattgcagctggtttaattacaaagattttataa
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