Cyphomyrmex costatus: 108772883
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Entry
108772883 CDS
T11118
Name
(RefSeq) F-box/LRR-repeat protein 20 isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccoa04121
]
108772883
Ubiquitin system [BR:
ccoa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108772883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF7885
LRR_6
F-box-like
LRR_4
LRR_At5g56370
F-box
LRR_8
LRR_At1g61320_AtMIF1
F-box_4
Motif
Other DBs
NCBI-GeneID:
108772883
NCBI-ProteinID:
XP_018394029
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MIHSGRTRLELTWVFHDDEAQINKKLPKELLLRIFSYLDVVSLCRCAQVSKAWNVLALDG
SNWQRIDLFDFQRDVEGPVIENISRRCGGFLRQLSLKGCQSIGNNSMRTLAQSCPNIEEL
NLSQCKRISDATCAALSSHCPKLQRLNLDSCPEITDMSLKDLAAGCPLLTHINLSWCELL
TDNGVDALAKGCPELRSFLSKGCRQLTDKAVMCLARYCPNLEAINLHECRNITDDGVREL
SERCPRLHYVCLSNCPNLTDATLISLAQHCPLLNVLECVACTHFTDTGFQALARNCKLLE
KMDLEECLLITDATLTHLAMGCPRLEKLSLSHCELITDEGLRQIALSPCAAEHLAVLELD
NCPNISDNGLNHLMQACHNLERIELYDCLHITREGIRKLRAHLPNLKVHAYFAPPTPPPS
AGASRQRYCRCCVIL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgatacactccgggcgcaccaggctcgagctaacatgggtgtttcacgatgacgaggcg
cagattaacaagaaactgccaaaagaattactactcagaattttttcgtacctcgatgtc
gtatcgctatgccgttgtgcccaagtaagcaaggcctggaacgtattggcgctcgatggg
tccaattggcagaggatcgatctcttcgattttcaacgagacgtggagggaccagtaata
gaaaatatctcgaggcgttgtggcggattcctcaggcagctctcactcaagggatgccaa
agcatcggcaacaactcgatgcgcaccctagcccaatcgtgtcctaatattgaggagctt
aatttgagtcagtgcaagaggatctcggacgcgacatgcgcggccctaagcagtcattgc
cccaagctccagcggctgaatctggactcctgccccgagataacggacatgtccctgaag
gatctcgcggccggctgcccactgctcactcacataaatctctcgtggtgtgagctactc
accgacaacggagtcgacgcgctcgccaagggctgcccggagctccgcagcttcctgagc
aagggatgccgccagctgacggataaggccgtaatgtgcttagcgcgctactgtcctaat
ctcgaagcgatcaatctacacgaatgcaggaatataacggacgatggagtcagagaactt
agcgaacggtgtccacggctgcattacgtttgcttgtcgaattgccccaatttaacggac
gcgacgttgattagcctggcacaacactgtccacttctcaatgtactcgagtgcgtcgcg
tgcacccatttcacggatacgggttttcaggccctcgcgagaaactgcaaactactcgag
aagatggatctggaagagtgccttttaatcactgacgccacccttactcatctggcgatg
ggttgtccgagattggagaaactaagcctgtcacactgtgagttgatcaccgacgaaggc
ctgagacaaatcgcgctgtcgccatgtgcggcggaacacctagccgtcttagagctggac
aactgcccgaacatctcggacaacggtctgaaccatctgatgcaggcctgtcacaatctc
gagcgtatcgaactttacgactgcctacacattaccagagagggcatacgtaaactcaga
gcccatctaccaaacttaaaagtgcacgcgtatttcgcaccgccgactccgccacccagc
gcaggagcctcgcgacaacgatactgtcggtgctgcgtcattctgtga
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