KEGG   Cyphomyrmex costatus: 108773364
Entry
108773364         CDS       T11118                                 
Name
(RefSeq) retinoblastoma-binding protein 5 homolog
  KO
K14961  COMPASS component SWD1
Organism
ccoa  Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccoa03036]
    108773364
Chromosome and associated proteins [BR:ccoa03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     108773364
    COMPASS/SET1 complex (yeast)
     108773364
    MLL-HCF complex
     108773364
    MLL3/MLL4 complex
     108773364
SSDB
Motif
Pfam: WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 ANAPC4_WD40 Beta-prop_IFT140_1st EIF3I Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_LRRK2 Beta-prop_WDR75_2nd Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_SPT8 WDR54 WD_LRWD1 Beta-prop_NUP159_NUP214 Frtz Beta-prop_TEP1_C Beta-prop_RIG_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st PQQ_3 Beta-prop_WDR11_1st Beta-prop_EIPR1
Other DBs
NCBI-GeneID: 108773364
NCBI-ProteinID: XP_018394644
LinkDB
Position
Unknown
AA seq 465 aa
MNLELLESFGQNYPEEFDGTLDCISLAVTCTFNKRGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHVHPVCSLSWSRNGHKLLSASTDNNVCIWDVLSGECDQKFRFPSPILKVQFHPRNL
NKFLVCPMRHAAVMVGVEGAHRVIPLDEDSDLNIVASFDRRGDYVYTGNARGRVLVLDAE
TLNVKASYKITQGTASNTAVKSIEFARRGSCFLVNTADRVIRVYDSTEILACGKDGEPEP
IQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYVWEKSIGNLVKILHGTKGELLLDV
VWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDLSDEDKSV
VQGEEAQDEEIEVDVASIDRVAAFCSSDEETEDIGSLQFLPISPDVEDSEDNQIMPHEPP
MKKHRSYDIDLQGAPTDETHPLLNKGKDKPTTKKGRPRLEYKKGK
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgaacttggaactattagagtcatttggtcaaaattatccagaggaatttgatggcaca
ttagattgtatatctcttgctgtaacctgtacatttaataaaagagggacattacttgct
gtcggatgtaatgatggaagaattgttatttgggattttttgactcgtggtatagctaaa
attattagtgctcatgtacatccagtatgttcattgagttggtctagaaatggtcataag
ttactaagtgcatcgaccgacaacaatgtatgtatatgggatgttttatctggagaatgt
gatcagaaattcagatttccttctccaatattaaaagtacagtttcatccaagaaatctc
aacaagtttttagtatgtccaatgcgtcatgctgctgttatggttggtgtcgaaggagca
cacagagttataccacttgatgaagatagtgatttaaacatagtagcatcatttgatcga
cgcggagattacgtgtatacaggaaatgctcgtggtagagttttagttcttgacgctgag
acattaaatgtaaaagcctcttacaaaataacacaaggcactgccagtaacacggcagta
aaaagtatagaatttgcacggcgaggttcctgttttctagttaatactgctgatagagta
atccgtgtatatgatagtactgaaatattagcgtgtggtaaagatggtgaacctgagcca
atacaaaaattgcaagatcttgtaaataaaacaatgtggaaaaaatgttgtttttctggt
gatggggagtatgtgtgtgccggatcagcaagacaacatgcattatacgtatgggaaaaa
agcataggaaatttggtgaaaattttacatggaaccaaaggagaacttttactcgatgtt
gtatggcatccagtcaggccgataatcgcatctatatcttcaggcgtagtttctatttgg
gcacaaaatcaggtagaaaactggtctgcgttcgcgccagatttcaaagagttggatgaa
aatgttgaatacgaagaaagagaaagtgaatttgatttgagtgacgaagataagtctgtt
gttcaaggagaagaagctcaggatgaagaaatagaggttgacgttgcatcaattgacaga
gttgctgcattttgcagctctgacgaagaaactgaagatattggttcgcttcaattttta
cctatatctccagatgtggaagattccgaagataatcaaataatgccacacgaaccgcca
atgaagaaacatcgttcatacgatatagatttacagggagcaccgactgacgaaactcat
cccttactaaataaaggaaaggataaaccaaccacaaaaaaggggagaccaagactagaa
tacaaaaagggaaagtaa

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