Cyphomyrmex costatus: 108773463
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Entry
108773463 CDS
T11118
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108773463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccoa04131
]
108773463
Membrane trafficking [BR:
ccoa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
108773463
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
DUF3896
Motif
Other DBs
NCBI-GeneID:
108773463
NCBI-ProteinID:
XP_018394781
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MTPAITGMEEQEKLLEDAIGVVKVQAFQMKHCLDKSKLMDALKHASTMLGELRTSLLSPK
SYYELYMAITDELRHLELYLLDEFQKGRKVTDLYELVQYVGNIVPRLYLLITVGLVYIKT
TPGLKRDLLRDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDVTEGDDEDGTVRDSIDFV
LMNFAEMNKLWVRMQHQGHSRDKERKEREREELRILVGTNLVRLSQLESVTLDKYKKLVL
PGILEQVVSCRDAIAQEYLMECIIQVFPDEFHLQTLNAFLKSCAELQNGVNVKNIIISLI
DRLAAFSQRSDGVGGPGSPSQVPGIPQDVKLFDVFSDQIATIIQTRQDMPSEDIVSLQVA
LINLAHKCYPDRVDYVDKVLFTTVQIFQKQNVDKLEYNSAVSRELVRLMKIPVDNYKNIL
TVLKLEHYAPLLDYFDYEGRKSLAIYIITNILENETLIPMQEQVDAVLFMVSSLVQDQSD
QPNIEEDPEDFAEEQGLLGRLIHHFRSETPDQQYMILSAARKHFSAGGNKRIKFTLPPII
FQSYQLAFTYKALKDQDDMWQKKCQKIFQFCHTTITALMKAELAELPLRLFLQGAIAIGE
IRFDNFEMIAYEFMSQAFSIYEDEISDSKAQLAAITLIIATFEQMSCFGEENAEPVRNQC
ALYASKLLRKPDQCRGVATCSHIFWSGKSLATGGKEMQEGSKVLDCLKKGIRIASQCMDT
SVQVQLYVELLNHYIYFYEKGNTVVTVQILNQVIAKIREELPNLEASEETDQIQKHLANT
LEHLRNRMESPDSDGLSYQGLVL
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgacacctgctataacggggatggaggaacaggagaaattgttggaagatgcaattgga
gtggtaaaagtccaagcttttcagatgaaacactgtctggacaaatccaaactaatggat
gcgctaaaacatgcctctaccatgttaggagaactcaggacttcccttctaagtccaaaa
agctactatgaattatatatggcaatcacagatgaattacggcatttggaactttatttg
ttggacgaatttcaaaaaggaagaaaagttacagatctctatgaattggtacaatatgtt
ggcaatattgtacctagattgtatttacttatcactgttggtctggtttatatcaaaaca
acgcctggcttaaaaagagatcttctgagagatcttgtagaaatgtgtagaggcgtgcaa
catccattgcgtggtctatttttaaggaattatttgttacaatgcacaagaaatatcttg
ccagatgtcaccgagggtgatgatgaagatggaactgttcgtgacagcatagattttgtt
ctgatgaattttgcagaaatgaacaaattgtgggtacgtatgcaacatcaaggtcatagt
agggataaagaaagaaaggaaagggaaagagaagaacttcggattttagtcggaacaaat
cttgtacgacttagtcaactagaatctgtaacattagataaatacaaaaagcttgtattg
ccaggaatcttggagcaagtagttagttgtagagatgcaatagcacaggaataccttatg
gagtgtataattcaagtctttcctgatgaattccatttacaaacgttaaacgcatttctg
aagtcgtgtgcagaattgcaaaatggagtaaatgttaaaaacataattatatcattgatt
gatcgacttgctgcctttagtcaacgatccgatggtgtaggaggaccgggaagtcctagt
caagtaccaggaattccacaagatgtcaaactgtttgatgtatttagtgatcaaattgca
actatcatacagacgagacaagatatgccttctgaagatattgtgtccctccaagtggcc
cttataaatttagcacataaatgctatcctgatcgtgtggattatgttgataaagttttg
tttacaacagttcaaatatttcagaaacaaaacgtcgataaattggagtacaatagtgct
gtttcaagagaactagttagattaatgaaaattcccgtagacaattataaaaatatatta
acggtgcttaagcttgaacactatgctcctcttttagattattttgattatgaaggcaga
aaatcactagctatatatataataacaaatattttggaaaatgaaacattgattccaatg
caagagcaagtagacgcagtgctcttcatggtatcttccttagtgcaagatcaatcagat
caaccgaatattgaagaagatcctgaagattttgccgaagagcagggattgctcggaaga
ttaatacatcattttagatcggaaacaccagatcagcaatatatgatactaagcgctgca
aggaagcatttcagtgctggcggtaacaaaagaataaaattcactttacctcccataatt
ttccaaagttatcagttagcatttacatacaaagcattgaaagatcaggatgacatgtgg
caaaaaaagtgtcaaaagatttttcagttctgtcacacgactatcacagcattgatgaag
gctgaattagctgaactacctttaagactatttctgcaaggggcaatagcgatcggagaa
attcgttttgataattttgaaatgattgcttatgagttcatgagccaagcattttcgata
tatgaagatgaaataagtgactcaaaggctcagcttgcagcgattaccttgatcattgct
acattcgaacaaatgagttgttttggtgaagaaaatgcagagcctgtacgcaatcagtgt
gctttatatgctagtaaattattgagaaagcctgatcagtgtagaggagtcgctacttgt
tcacatatattttggtctggaaaatctttggctacgggcggaaaagagatgcaagaaggc
agcaaagtactggactgcttaaaaaaaggcattagaatagcaagccagtgcatggacaca
tctgtgcaagtacaactgtatgtagagctgctgaatcattacatttacttctacgaaaaa
ggaaatacagttgtaaccgtgcaaatattaaatcaagtgattgctaaaattagagaggaa
cttcccaatctggaagcgagcgaagaaaccgatcaaatacagaaacatttagcaaatacg
ttagaacatttaagaaacaggatggagtcaccagattctgatggactttcctatcaaggt
cttgttctttaa
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