Cyphomyrmex costatus: 108773531
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Entry
108773531 CDS
T11118
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108773531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108773531
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108773531
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
108773531
NCBI-ProteinID:
XP_018394871
LinkDB
All DBs
Position
Unknown
AA seq
282 aa
AA seq
DB search
MDLQYKTIHPVKYMQDHLEQNVRTDGRKFLSFRPVSVNVSSIIQADSSAIFKLGDTTAVC
GIKAELATPNLNTPDHGYIIPNVELPPLCSSKFRPGPPSEQAQVLSKSIDIILSNSAALD
LTDLCICKSKLVWVLYCDILCLNYNGSVIDACIGALMAALKTLTLPEVNYIKETGVTTVH
PKNRKKFTVRTLPISTSFAVFEKQLLIADPTDDEEDLSSGKFSIVMDDEETICYVHKPGG
IPISQNLFSKGLEITKTRAKLVRSVIDAAISTLNVNDVKINT
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggatttacagtacaaaactatccaccctgtgaaatatatgcaagatcatttggaacaa
aacgttcggacagatggtaggaaatttttgtcgtttcgaccagtaagtgtgaatgtttct
tcaatcattcaagcagacagttcagcaatattcaaattgggtgacacaactgcagtttgt
ggtattaaagctgaattagcaacaccaaacttaaacactccggatcatggttacataata
ccaaatgtggaattacctcctctctgttcttcaaagtttcgtccaggcccacctagcgaa
caggcacaagtgctttccaaatcaatagatattattttgagtaactctgcagcacttgac
ttaacagacctttgcatctgcaaaagtaaattagtatgggtcttatactgcgatatctta
tgtctgaattacaatggctcagttatagatgcttgcattggagcattgatggcagctctc
aaaacattaaccttacctgaggtaaattatattaaggagacaggagtaactaccgtacat
ccgaaaaacagaaaaaagtttactgtgagaacattaccaatttctacatcgttcgcagta
tttgaaaaacaattattaatagctgatccaacggatgatgaggaagatttgtcatcagga
aaattttctattgtgatggatgatgaggaaacaatttgttatgtacataaacctggcgga
attccaatctctcagaatttattttccaaaggactggaaataacgaaaacaagagcaaaa
ttagttagatcggtaatcgacgctgctatttcaacactcaatgtaaacgatgtgaaaata
aatacttga
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