Cyphomyrmex costatus: 108773698 Help Entry 108773698         CDS       T11118                                  Name (RefSeq) DNA ligase 1 isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism ccoa  Cyphomyrmex costatus Pathway ccoa03030   DNA replication ccoa03410   Base excision repair ccoa03420   Nucleotide excision repair ccoa03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ccoa00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     108773698    03410 Base excision repair     108773698    03420 Nucleotide excision repair     108773698    03430 Mismatch repair     108773698  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ccoa03032]     108773698    03400 DNA repair and recombination proteins [BR:ccoa03400]     108773698 Enzymes [BR:ccoa01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      108773698     6.5.1.6  DNA ligase (ATP or NAD+)      108773698     6.5.1.7  DNA ligase (ATP, ADP or GTP)      108773698 DNA replication proteins [BR:ccoa03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     108773698  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      108773698 DNA repair and recombination proteins [BR:ccoa03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      108773698    NER (nucleotide excision repair)     Other NER factors      108773698    MMR (mismatch excision repair)     Other MMR factors      108773698 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme Motif Other DBs NCBI-GeneID:  108773698 NCBI-ProteinID:  XP_018395103 LinkDB All DBs Position Unknown AA seq 997 aa AA seqDB search MLKILTTCSRLSSLALPMQRLELAVAAHNRFVFNWIHTTNSHNLSDKQNQNATENGKRKR DSSNSSSPSSKNVKRTKSKTISKTPSPSVKPRTKLGATPKIKPSKFSPGASKKTQKRQLK DTPGEKKKKQEENENINDIEEKVKNNHTENSIVEEKNETKKSASSKKKSKSNETEKVKKT VKKKWTKIVQLIDSSDDETHLPLPKSPKKLESDNEEKKTESIVESNNINKNASDNDANEN ASDNEEKNQSSKKESTPEKSQTSSKNESPKKKFTPEKSQNPSKNEVPKKESTPEKLQTLS EDEKSKKEPKSEKKTKKVPNFFMSKQKGDAKDDKMSNGKSANQSYNPSASVYHPIDNACW KRGDKTPYSAFARTLEIIEETSARLKIIEILSNYFRSVIVLSPEDLLPSVYLCLNQLAPA YEGVEFGIADTNLMKAIAQCTGRTLAQIRSDVQEVGDLGIIAENSKSNQRTMFQPAPLTV PNVYSKLMEIAQMTGHASLSKKLDKIQTLFVACRNTEVRYLVRLVAGKLRIGLAEQSVLQ ALALACAMTPPEQKYPPEILNASKKMSSDRFKEKYDEIALILKTTYCECPNYNLIIPVLL EDGINTLPSKCKLTPGIPLKPMLAHPTKGVQEVLTRFEGLKFTCEWKYDGERAQIHVADN GQIKIYSRNQEDNTTKYPDIIKRFKNSRGDEVKNCILDCEAVAWDSEKKQILPFQILSTR KRKDANEEDIKVQVCVFMFDLLYLNDEPLVKEPFVKRRELLKQHFKEVEGEWKFANSLDA STMEEVEVFLDESVKGNCEGLMVKTLEKEATYEIAKRSRNWLKLKKDYLDGVGDTLDVVV IGGYIGKGKRTGTYGGFLLACYDQENEEYQSICKIGTGFKEDDLENHTKFLKDHIVPQAK SYYRFDSSHEPDHWFEPIQVWEIKCADLSLSPVHRAAIGIVDPEKGISLRFPRFIRIRED KTCEQATSAQDVANMYNNQEQIKNKTPVSKATEEDFY NT seq 2994 nt NT seq  +upstreamnt  +downstreamnt atgctaaaaatccttactacatgctcgcgcttgagctcgttggctctgccgatgcaacgg ttggagcttgcagtcgcagctcacaatcgatttgtttttaattggatacatacaaccaac agtcacaacttgtcggacaaacagaatcagaatgctacagagaatggcaaacgaaaaaga gatagtagcaacagctccagtccatcttcaaagaacgttaaacgtacaaagtcaaagaca atttctaagacaccttcaccaagtgttaagcctcgtaccaaactaggagctactccaaaa attaaacccagtaagttttcccctggagcatctaaaaagacacagaaaaggcaactgaaa gatacacctggtgaaaagaaaaagaagcaagaagagaatgaaaatataaatgatattgaa gagaaggtaaagaataatcatacagaaaacagtatagttgaagagaaaaacgaaaccaaa aaatctgcatcttcaaagaagaaatcaaagtccaatgagacagaaaaagtaaagaagact gtgaaaaagaaatggaccaagatagttcagctgatagattctagtgatgatgagactcat ctacctttacctaaaagtccaaaaaaattggaaagtgacaatgaagagaagaagaccgaa agtatagttgagtctaacaatataaataaaaatgcttctgataatgacgcaaacgaaaac gcttcggacaatgaagagaaaaatcaaagttcgaagaaagagtccacacctgagaagtca cagacttcctctaagaatgaaagtccaaagaaaaaatttacacctgagaaatcacaaaat ccctctaaaaatgaagttccaaaaaaagagtctacacccgagaaattgcagactctctct gaggatgaaaagtcaaagaaagagcctaagtctgaaaaaaagactaagaaagtgcccaac ttttttatgtctaagcaaaagggcgatgcaaaagatgacaaaatgagcaatggaaagagt gccaaccagtcttacaatcccagcgcgtccgtctatcatccgatagacaatgcgtgctgg aaacgaggggataagactccatatagcgcattcgcgcgcactttggagattatcgaggaa actagtgcaaggttaaagataatagagatattgtcaaattacttccggtctgttatagtc ctaagtcccgaggatcttttgccgagcgtttacctgtgccttaatcaattagctccagcg tacgaaggagttgagtttggaatcgctgacacgaatctaatgaaggcgatagcgcagtgt actggtagaacgctggcgcaaattagatctgacgtccaggaagttggtgatttaggaatt atagcggaaaatagtaaatctaatcagagaaccatgtttcaaccggcaccattaacggtt cccaatgtatattccaaattgatggaaattgctcaaatgacggggcacgcgtctctatcg aaaaaattggataaaattcagacgttgtttgtagcgtgccgtaatacagaagtaagatat ctagttagattagtagctggaaagcttcgtattggattggcggagcaatctgttttacaa gcattggctttagcttgcgcgatgacaccgccggaacaaaagtatccaccagaaattctg aatgcaagcaaaaagatgtcgagtgatcgtttcaaagagaaatatgatgaaatagcactc atattgaaaacaacgtattgtgaatgtccgaattataatcttataattcctgttttactg gaagatggaattaataccttgccgagtaagtgcaaacttactcctggaatacccttgaaa cctatgttggcacatcctactaaaggtgttcaagaagtcctaacgcgattcgagggtttg aaatttacttgcgaatggaagtatgacggggaaagagctcagatacacgttgcggataat ggtcaaataaaaatatacagtagaaatcaagaagataatactaccaagtatccagatatc attaagcgatttaagaatagtcgcggtgatgaagtgaagaattgtatactcgattgcgag gcggtcgcatgggatagtgagaagaaacaaattttaccattccaaatactcagtacaaga aagcgaaaggatgctaatgaggaggatattaaagtacaagtatgcgtgtttatgttcgat ttgttatatctaaatgatgagccattggtaaaggaaccgttcgtgaaacgtcgtgagtta ttgaaacagcatttcaaggaagtggaaggtgaatggaaattcgctaatagcttagatgcc tcgactatggaagaggtggaagtttttttggatgaatctgtgaagggaaattgcgagggt ttgatggtgaaaacgttggaaaaggaggcgacctatgagatagcgaagcgatcgcgaaac tggttaaagctgaaaaaagattatttagatggcgtcggcgatacgctcgatgtagttgta atcggtggttatatcggcaagggtaaaaggactggtacttatggtggtttcctcttagct tgttatgatcaagaaaatgaagagtatcagagcatctgtaagatcggtacaggatttaaa gaagatgacctcgaaaatcacactaaattcctcaaagatcacatagtgccacaggccaaa tcgtattatcgtttcgatagcagtcatgaaccggatcattggtttgagccaattcaagtt tgggagatcaagtgtgccgatctctccctctcgcctgtacacagagcggctatcggaata gttgatccagagaagggaatatctttaaggtttccgcgatttatcaggatccgcgaggat aagacttgcgagcaggccacttccgctcaagacgtggcaaacatgtacaataatcaagag cagataaaaaataaaactcctgtatcgaaagccacggaggaagatttctattag

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