Cyphomyrmex costatus: 108773762
Help
Entry
108773762 CDS
T11118
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03013
Nucleocytoplasmic transport
ccoa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108773762
03015 mRNA surveillance pathway
108773762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108773762
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108773762
mRNA cycle factors
P-body specific factors
108773762
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
108773762
NCBI-ProteinID:
XP_018395186
LinkDB
All DBs
Position
Unknown
AA seq
1154 aa
AA seq
DB search
MSQNVNEAASAEKEAIAEEPDAVSEKDRQFLTEYVRETEQRLATKEEIRAANLNPARPPD
ASFSKLDSSLKKNTTFVKKLKNFSMAQLDTVLKDMATLNLTKYVSEVATALVDAKIKMID
VAPAIRVCSFLHQTYAEFSTHFFENWQRILSLKVGDKIANPSKLRVDLRFYAELVNAGIF
THKQGLPLLGSILTVLINMDKEEHNNASIILSFCRHCGEDYAGLVPKRVRNLSEKLNVSI
PKSKMLSPDKQQNVKLLLREYYNSLCKHMLKEHKELQAFEKQNRKILQTRGELSSERKEK
LEALQVCYERLLTNVQSFSDTLDEPMPELPVDNEIKAEVEETLKMINEGEESAMLEDMWG
DEETRRFYEVFPDLTVFLPGSYLKDTPKDIPKTDTAITEDTLDEEIVFDELEESEKVEEP
PEVEVEEPQISNTSNKILLDAFLTHLPNCVNREMIDNAAVNFLINLNTKHNKKKLVKALF
GVSRIRQDLLPFYSRLAAILYPVMPEIGNDLCQMLKQDFKYHVRKKDQINIESKIKVVRY
IGELVKFKLYSKIEALYCLKVLLHDFTHHHIEMACNLLEICGRYLFCSPESHQRTKVYLE
QMMRKKAVTALDSRYVTIIENAYYFVNPPESTGGVTKKDRPPVHEFIRKLLYQDLSKTNT
DKVLKWMRKLDWEDDSVSSYAIKCLTAAYNVKYPNIRCVGSLLAGLVAHYETIGPQVVDG
VLEDIRLCMEINLPKFNQRRIAMVKYLGELYNYRMVESGDIFRTLYLLITFGVSIDHSSP
SVLDPPEHLFRIRLVCTLLETCGQYFSGGSSKKKLDYFLVFFQNYFWFKYTDPIWTSENP
FPVGIDYMYRDTLTMLRPKMQLFQNYKEAQCAVEELRTTLYPTLGNPPVDDTTAEGENDM
SVIIEGDEEAALAGNGSGDAKGMAELHFEESEDCSEAQSEEEWTADAERDGTQENTQGDR
SQSLSADGGTEGVIVDVTEELDAALPSGPRRVSCPEDDDFLSALDKMVSDNIQDRMRDSV
KPQQVDISVPLHVKSTKKTYEQLQERPTDNSTIDFVLMLRKGNKQQYKNLAVPVSSELAM
NLRNREQEQKEEKERVKRLTLNITERQEEEDYQETMNQSTRPVTVNLNRERRQKYNHPKG
APDADLIFGPKKIR
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaacgtgaacgaagcggcatcggctgaaaaagaggctatagctgaagaaccg
gatgccgtctccgaaaaggaccggcagtttttgactgagtatgtacgagaaacagaacag
agactcgcgacgaaggaagagattcgcgcggccaatcttaatcccgcaaggcccccagat
gcatcattcagtaaacttgactcaagcctcaagaaaaacaccacatttgtcaagaaactg
aagaactttagcatggcccaacttgacacagttttgaaagacatggctactttgaacctg
accaaatacgtgagtgaagttgccactgctctggtggatgccaaaataaagatgattgat
gtagcacctgctattagggtatgtagttttctccatcagacgtacgctgaattttccact
catttttttgaaaattggcaaaggatactgtcattgaaagtcggcgataagattgcaaat
cccagcaagttaagagtagatttacgattctatgcagaattagtgaatgctggaatattc
acacacaaacaaggcttgccattacttggctcgatattgactgtattaatcaatatggat
aaagaggagcataataatgctagcataatattgagtttttgtcgacattgtggcgaagat
tacgctggtcttgtacctaaaagggtgcgaaatctgtcggagaaattaaatgtttcaatt
ccaaagagtaaaatgttatcaccggacaagcaacagaatgtcaagctgttgttgcgtgaa
tattacaactctttgtgtaagcatatgctgaaggagcacaaggagctgcaggcattcgag
aaacaaaatcgcaaaatactgcagaccaggggagaactgagttcagaacgaaaggagaag
cttgaagctttacaagtctgttatgagcgtttattaaccaatgtacagagcttttccgat
acgttagatgaaccgatgcccgagcttccagtggacaacgaaataaaagcagaagtggag
gaaacactgaaaatgatcaatgagggagaagaaagcgctatgttggaggatatgtggggt
gacgaagagacgagacgtttctatgaggtattcccagatctgactgtcttcctaccaggt
tcatatttgaaggatactccgaaagatatcccaaagacggacacagcaataacggaagat
actctcgatgaggaaattgtctttgatgagttggaagaatctgagaaagttgaagagcca
cctgaggtagaagtggaggagcctcagatttccaatacaagtaacaaaatactgttggat
gcttttctgacacatctgccgaactgtgtaaatcgcgaaatgattgacaatgccgcagtc
aatttcctgataaatctcaatacgaagcataacaagaagaagctggtaaaggctcttttc
ggcgtttcgagaatccgtcaggatctactacccttctactctcgcttggcagccattctt
tatccagtaatgcctgagattggcaatgacctgtgtcagatgttgaaacaagattttaaa
tatcatgttcgtaagaaggatcagatcaatattgagtcgaagatcaaagtggtccgctat
atcggtgagctcgtcaaattcaaactttactccaaaatagaggcattgtactgtctaaag
gttttactacacgactttacacatcatcacattgaaatggcttgcaatttattggagatt
tgcggccgatatcttttctgttcaccagagtctcatcaaaggaccaaggtctatctggag
caaatgatgcgcaaaaaagcagttactgcactagattcgcgttacgtcacgatcatcgag
aacgcgtattacttcgtgaatccaccagaatcgaccggcggcgttacaaagaaggacaga
ccgcccgtacatgaatttattaggaaactactataccaagatctctctaagacgaatact
gacaaagtgctcaagtggatgcgcaaacttgattgggaggacgacagcgtatcatcctat
gctataaaatgtctcactgccgcctacaatgttaaatatcccaatattcgatgcgttgga
agcctgttggccggcttggtggcccattatgagactatcgggccacaggtggtcgacggt
gtactcgaagacatacgactatgcatggaaatcaatctacccaaattcaatcaacgacgc
atcgctatggtcaagtacttgggtgagctgtacaactatcgaatggtggagagtggcgat
attttccgtactttgtacttgcttattactttcggcgtcagcatagaccattcgtcgcca
agcgtgctcgatccgcccgagcatctcttccgtattcgtctagtatgcacattattggag
acgtgtggccagtacttcagtggcggatcgagcaagaaaaaactcgattattttctcgta
ttcttccagaactacttctggtttaaatatacagatccgatctggacgtccgagaatccg
ttccccgttggtatagattacatgtatcgtgatacattaacaatgttacgacccaaaatg
caattattccagaattacaaagaagcgcaatgcgccgtagaagaattgcgcaccacactc
tatccaaccttgggtaatcctccagttgatgatactaccgcggaaggcgaaaacgacatg
agcgttatcatagaaggtgatgaagaagcagcattggccggaaatggtagtggggatgcc
aaaggtatggccgaactgcattttgaagagtccgaagattgctcggaagcacagtcggaa
gaggaatggacagccgatgcagaacgcgacggcacccaagaaaacactcagggtgatcga
tctcagagtctatcagcagacggtggcactgaaggcgtgattgtagacgtgacagaggaa
ctagatgcagcattaccatctggaccacgacgcgtaagctgtccggaggatgatgatttc
ctgtcggcactagataaaatggtctcagacaatatacaggatcgtatgcgagattcggta
aagccgcaacaagtggatatctccgtcccattgcacgtgaagagtacaaagaagacatac
gaacagctgcaggagaggccaactgacaatagcacaatagactttgtgttgatgctgagg
aagggtaataaacaacaatacaagaatctcgcggttccggtgtcatccgagttggctatg
aatctcagaaatcgcgaacaggaacaaaaagaggagaaagagcgcgtgaagagactaact
ttaaacattactgagaggcaagaggaggaagattatcaggaaactatgaatcagagtacg
agaccggtcaccgtaaatttgaacagggaacgacgacaaaagtataatcaccctaaagga
gcacctgatgccgatctcatctttggaccgaagaaaattcgataa
DBGET
integrated database retrieval system
