Cyphomyrmex costatus: 108773775
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Entry
108773775 CDS
T11118
Name
(RefSeq) protein Tob1-like
KO
K14443
protein Tob/BTG
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108773775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108773775
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108773775
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108773775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BTG
TFIIA
DUF2992
VPS13_N
EFTUD2
MPM1
Connexin
SelP_N
Zip
Motif
Other DBs
NCBI-GeneID:
108773775
NCBI-ProteinID:
XP_018395200
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFKGHWYPEKPFKGSAFRCLKT
GDPVDPVLERAAKESGVPIQDILENLPAELAVWVDPGEVSYRIGELNAVKILYSETGDPH
DETSADREVTKTFNPEAQCFRPIEAVSTSLSGLSLSPKSTSPFSSSLGSNASNGSSNNQQ
NGHGSGSSSAPSPTPITSSFKGSPSPVPAFIPRTTAPLTFTTATFAQTKFGSTKLKTSSK
RANRMSPTEFSNYIKQRAAMQQQIHHHHHHQQHQSQQQQQQQQQQQQQQQQQQQQQATTA
GAGLPVSQSSPRSRSLSPGSIVAGAGQQHTDPSAYFFQHGPAAAAAAYHAQFPHRNIFDS
SASHGGYLPADLYAGTKFPSSYLDPTTLAGHQFYGGGMNGTGAGTGGAVNGTTGAGAGTQ
GAGSAGTGNLGPIGSATTNGNVNAGAAAAAQQQDKSALVEGLNNFGLGSVAPYPASQYQH
LLVAN
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcgaggtgcaggtggcgcttaacttcgtgatatcatatctctacaataaactg
ccgcgtagacgagtcaacatctttggcgaggaactcgagaaggcgctcaaggacaagttc
aagggccactggtatccggagaagccgttcaagggctcggcgttcagatgcctgaagacc
ggcgatccggtcgacccggtgctagagcgcgccgcgaaagagagcggtgtgccgatccag
gacatcctggaaaatctgccagccgagctcgccgtctgggttgatcctggtgaggtgagc
taccgtatcggcgagttgaacgccgtgaagatcctctactcagagaccggcgacccgcat
gacgagacctcggccgatcgcgaggtcaccaagacctttaatccggaggcgcagtgcttc
aggccgatcgaagccgtgagcacgtccttgagcggtctcagcctcagtccaaagtcaacc
tcgccgttttcgagctccctcggcagcaacgctagcaatggctcgtccaataaccagcag
aacggccacggatctggttcctcgtctgcgccctcacccacgcccatcaccagctccttc
aagggctcgcccagcccggtaccggcctttatcccgcgtaccaccgccccgctcaccttt
actaccgccaccttcgcccaaaccaagttcggcagcaccaagctcaagactagcagcaaa
cgcgctaacaggatgtcacccactgagttctcgaactatataaagcagcgcgcagcgatg
cagcagcagattcaccatcaccaccatcatcagcagcatcagtcgcagcagcagcagcag
cagcagcaacagcagcagcagcagcagcagcagcaacagcagcaacaggcgaccacggct
ggtgcaggactgccggtctcgcagagctcaccgcgcagtcgtagcctatcacccggtagc
atagtcgccggtgctggacagcaacatacggacccgagcgcgtacttcttccaacatggc
ccagccgcggccgcggcggcgtaccacgcgcagtttccccatcgcaacatcttcgactcg
tcggcgagccacggtggctacctgccggccgatctctacgccggcaccaaattcccatca
tcgtacctcgacccgaccaccttggctggccatcagttctacggcggcggtatgaatggc
actggcgccggtactggcggcgctgtaaacggtaccaccggcgccggagccggtacccag
ggcgccggtagcgccggcaccggtaatcttggtccaatcggctctgcgacaaccaacggc
aacgtcaacgctggcgcggccgctgcggcgcagcagcaggacaagagcgccctggtcgag
ggcctcaacaacttcggcctcggctcggtcgcgccctatccggccagccaatatcagcat
ttgctcgtggccaactaa
DBGET
integrated database retrieval system