Cyphomyrmex costatus: 108773783
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Entry
108773783 CDS
T11118
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108773783
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
Neur_chan_LBD
EGF_LMN_ATRN
Neur_chan_memb
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
108773783
NCBI-ProteinID:
XP_018395218
LinkDB
All DBs
Position
Unknown
AA seq
2185 aa
AA seq
DB search
MEETHGGSMSSATLSSVLFLLLFSRVANAQRSLEFFDLLPEDPKLYDKMRPPKKDGQATV
VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDNRLRLPENMTSEYRLLEVDWLKNMWRPD
SFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQECKLQME
SLSHTTDEMIFQWDPDVPLVVDENIELPQLQLVKNYTADCTQVYSTGNFTCLEVVFVLKR
RLGYYLFHTYVPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVS
YLKAVDAFMSVCTVFVFMALMEYCLVNIVLGDSDTPAAKPAPPPPPPCSSTSDSAKFDKI
FDIAAKKSPIVPPPGPTPAQRARMRALNIDRFSRVFFPFLFAVLNVTYWIIKCIRKNGGV
IGSVQRGDMSPMDVVTERHNRLGPTIPTSRGSHAKRPHPCEQSSCYPATGNLLIGRKDKL
TASSTCGLHGPERFCIVSHLKDRKKCFFCDASIPKQQHNIENIVSGSWWQAENGVENVTI
RFDLEAEFHFTHIIIRFQTFRPAAMLIERSYDFGKTWQVYRYFAHNCEHYFPDIPTHQPQ
KLTDVICETRYSAVAPSTGGDVIFRVLPRNLEIDNPYSKEVQNLLKITNLRIIMTRLHTL
GDDLLDDRAEIREKYYYAIQDMVIRGSCSCYGHASRCLPLPGVSDEENMVHGRCECTHNT
RGLNCESCEDFYNDLPWKPAVGKQTNACRPCNCNNHTNSCHFDETVYERSGRVSGGVCDD
CQHNTRGQNCEQCKPFYYHDVTKDISDLEACQPCDCDLNGSLDDGICDSRTDPLSGDESG
RCHCRANVGGRRCDRCKNGFWNFDPDNPEGCQACTCNILGTIDNQGCNVVTGECTCKRFV
TARDCNQCLPEYWGLSEDRDGCKPCDCDPGGSYENSCDVITGQCRCRPHVSGRTCNQPEQ
SYYTGSLDFLIYEGELSRATDNCQVVIREPYRDGRNSTWTGTGFMKALEGSVLNFTIDDV
RRSMWYDVIVRYEPMHPGVWEDVQIILERDSLPDPNGPCADWKPEYDRLWVQLPLRSRSA
VAQPSVCLEAGKRYNLLLQFRKFNSHVDTPLASILVDSIVLKPRIDVIPFFKAPGLGELR
RQEYERYHCNELYNDVNSVWSNVPDICRKYQNSIGYYVFDGAHSCECNPTGSRSLLCKNY
GGMCPCKPNVVGRRCDRCAPGTYGFGPEGCIPCDCDGVGALDNFCDVETGRCKCRPNTYG
RTCGQCEPGFWNFPHCQRCECHGHADNCDSKTGACINCRDFTTGHNCDRCVDDFYGDPRI
GVDIPCRACPCPGTRESGHSYANSCSLDSITQDVVCECFEGYSGPRCEHCAENYFGNPEI
PGGSCQLCNCNNNTDLRRVGNCDPHTGHCLQCLFNTDGPTCEVCKAGFYGDALRQDCQDC
RCNVLGTDKTAGSCDHRTGQCPCLPHVIGQLCDSCEENHWRIASGQGCDPCECDVVGSIS
DRCNPYDGTCECKPGFGGRRCNECQSNFWGNPNVECYPCECDVIGSASQQCDRETGVCVC
HKGIGGEKCDQCDRGYHGEAPQCSPCGECFDNWDLILDGLKNKTNAVIQEASRIQKVGTT
GVYSQEFDDMEESLNEVQDLISNTTIRSQDLDTLDNLAEELAKNISISTKQLEEVNNHLE
NLSQRVNLGDVALKRLRNRTNILHDAAADLRENATRLQEENVLGALNVTQQMAEQSRQAE
KMANDSTNVLGDAERFRKHTENLLAKNRASVDDAQERNKESLTKLNEKLKTFRMAIPELN
LRMCGDNVTECSSVCGGAGCGTCGGLSCDVGAVSKANQALDVAKQQTAKIKSHKDDAEQL
LRNMSQIKQDATAARSNAQDAFNIAWEAQSFFEKLAKDMANMIKQMLSTQDEDQPTPAMV
RALAYAILARNIQLEPNQIEQLADRIEDMVGSLTDSEKILADTKDDLQLAHDLEERANQI
KLTAIEKQVLANKMILLLNDAQKAQHLAQEAIDKAEADVSKSQKDLADIADVTKAAQIQA
NSTTQTVEALDTRLKQLQTQSAKNSFILTEIGTEAKKVADEAQAIDGKTKKLSEEYKRAD
ESLNQRVNKTKGDILRAKRLLTRASELTADTSTKSKDLDGMESVYKENERLLKELMSDID
GLMTEMERNMAEIEKKSQLYRQCSA
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atggaggagacacacggaggcagcatgtcttccgcgacactgtcgtccgttttgttcctt
ctacttttcagtcgtgtcgcgaacgctcagagaagtttagaattttttgatcttttaccc
gaagatcctaaattatacgataaaatgcgccctcccaagaaagatggccaggcaaccgtt
gtgtattttcacgttactgtgatgggacttgattccatcgatgaaaattcaatgacatat
gccgctgatattttctttgcccaaacgtggaaggataatagacttcgattgccagaaaat
atgacgtccgagtacagattattagaagtcgattggctgaaaaatatgtggcggccagat
tccttttttaagaacgcaaagtcggtgacttttcaaacaatgacgataccaaatcactac
ctatggttatacaaggacaaaaccattctctacatggtgaagctgactctaaaactctct
tgcgccatgaactttttgatctaccctcacgatacgcaagaatgtaaactgcaaatggaa
agtttgtcgcacacgacagacgaaatgatcttccagtgggatcccgatgttcccctcgtt
gtagacgaaaatatcgagctgccccaattacaactcgttaaaaattatacggccgattgc
acgcaggtttattccactggtaactttacttgtctcgaagtcgtgtttgtgctgaaacga
cgtctcggttattacttgtttcacacctacgtgccgacatgcttgatcgtcattatgtcc
tgggtatcgttctggataaagcccgaggccgcacccgcccgtgtcaccttgggagtcacc
tcgttgctcacactttccacgcaacacgccaagagtcaggcctctttgccgccggtttcg
tacctaaaggcagttgacgccttcatgtcggtctgcacggtgttcgtgttcatggcactg
atggagtattgtctggtgaacatcgttcttggtgattcagatacgcccgcggcgaaacct
gcacctccgccaccgccgccgtgctcgagcacctcggattcagccaaatttgacaagatc
ttcgatattgctgccaagaaatcgccgattgtaccgccacccggacccaccccagcacaa
agggcgcgaatgcgggcactgaacatcgaccgcttctcgcgagtcttcttcccttttctg
tttgccgtgctgaacgtcacctattggataattaaatgtatacgcaaaaatgggggtgtt
atagggtcggtgcagagaggagatatgtcacccatggatgtggtgacagagcgtcataat
cggctagggccgactattcccacgtcaagaggttcgcacgcgaaaagaccacatccctgc
gaacagagctcgtgttatcccgcaaccgggaacttgctaatcggccgtaaggacaaactg
actgcttcctcgacatgcggacttcacggccccgaaagattctgcattgtttctcatctt
aaggacagaaagaaatgcttcttctgcgatgcatcgatacctaaacagcagcataatatc
gagaacatcgtcagcgggtcgtggtggcaggccgaaaacggagtggagaatgttacgata
cgcttcgatcttgaggcagagtttcacttcacgcatatcattattcgcttccaaactttc
cgaccggctgctatgttgatcgaacgatcgtacgattttggaaaaacctggcaggtatat
cggtactttgctcataactgcgagcattactttccagacattccgacccatcaacctcaa
aaattaacggatgtcatctgcgagacgagatactcggctgtagcaccgtccactggcggt
gacgtaattttcagggtgttgccgcgaaatttagaaatagataatccttattcgaaggaa
gtgcagaatttactgaagatcaccaatctcagaatcatcatgacgagactccatacttta
ggtgatgatttgctcgacgatcgggcggagattcgcgagaaatattactacgccatccaa
gatatggtgattcgtggctcatgttcttgctatggacacgcctctagatgtttaccatta
ccaggagtctctgatgaagagaacatggtccatggcagatgtgagtgtacccacaatact
agaggcctcaactgtgagagttgcgaagacttctacaatgatctgccgtggaagcccgcg
gtcggtaaacaaacgaacgcttgtagaccttgcaattgcaacaatcatactaattcctgt
cactttgacgaaacggtttacgagagatcgggcagagtgtccggcggagtctgcgacgat
tgccagcataatacgcgaggacagaattgcgaacagtgcaagccattctattatcacgac
gtgacgaaggatatctctgatctagaagcttgtcaaccttgcgattgtgacctaaacgga
tccttggatgatggtatatgcgactcaagaaccgatcctctgagtggcgacgagtctgga
cgctgtcactgtagagcgaatgttggtggacgtcgttgcgaccgttgtaaaaacggcttc
tggaacttcgatcccgacaatccagaaggatgtcaagcctgcacctgtaatatcttgggt
actatcgacaatcagggttgcaacgtggtgactggtgagtgcacgtgcaaacggtttgta
acagcacgcgactgcaatcaatgcttaccggagtattggggactctccgaggaccgcgat
ggatgcaaaccatgtgattgcgatcctggcggatcctacgagaattcttgcgacgtcatc
accggtcagtgcagatgtagaccgcatgtcagcggaagaacttgcaatcagccggagcaa
agttactataccggctcgctagattttctcatttacgaaggagagttgtctagggctacc
gacaattgtcaagtggtgatcagagagccttatcgcgatggtaggaacagcacgtggact
ggcacaggtttcatgaaggctcttgagggatcggtattgaacttcaccatcgacgacgtt
cgcagatcaatgtggtacgatgtgattgtacggtacgaaccgatgcatccgggggtctgg
gaggacgtgcagattattctcgagagagatagcttaccggatcctaatggaccgtgcgct
gattggaaacctgaatatgatcgcttgtgggttcaattacctctgcgttcaagaagtgcc
gtggcgcaaccgtctgtatgtctagaggcgggaaaacgttacaatcttctgttgcaattc
cgcaaattcaatagccacgtggacacgcctttggcctctatcctggttgattcgattgtt
ctaaagccgaggatagacgtaatacccttcttcaaggcgccaggtttgggtgaactgcgt
cgccaagaatacgaacgttaccactgtaatgaattatataacgatgtcaacagcgtgtgg
agtaacgtacctgacatctgcaggaaatatcaaaatagcatcggctattatgtcttcgat
ggcgctcattcttgcgaatgcaatccaacgggttctcgcagtcttctgtgcaagaactac
ggcgggatgtgcccgtgcaaaccaaacgtagttggtagacgctgtgaccgttgcgcaccg
ggaacctacggattcggtccggaaggatgtattccctgcgattgcgacggcgttggtgca
ctcgacaatttctgcgacgtcgagaccggacgctgtaagtgtcgccctaacacctacggt
aggacctgtggccaatgtgaacctggcttctggaacttccctcattgccaacgctgtgag
tgtcacggacacgcggataactgcgactcgaagactggggcttgcatcaactgtagagat
ttcaccaccgggcacaattgcgaccgttgcgttgacgatttttatggcgatccgcggatt
ggcgtggatataccttgcagagcgtgtccttgtccgggcacacgtgaatccggtcattcc
tatgccaacagctgttcattagactctataacgcaggacgtagtatgcgagtgtttcgag
ggatattccggacctcgctgcgagcattgcgccgagaattatttcggtaacccggagata
ccaggtggtagctgtcaactctgcaactgcaacaataacacagatttacgtcgtgtcggt
aactgtgatccgcacaccggtcattgccttcagtgtcttttcaacaccgatggtcccact
tgcgaagtgtgtaaagcagggttctatggagacgctctacggcaggattgtcaagactgt
agatgcaacgtcctgggcactgataagaccgcgggatcatgcgaccatcgtactggacaa
tgtccgtgtttgccgcacgtcataggacagctttgcgactcttgcgaggaaaatcattgg
agaatagccagcggacaaggttgcgatccttgcgagtgcgacgtagttggaagtatttca
gacagatgtaatccctacgatggcacttgcgagtgcaaaccaggatttggcggcaggcgg
tgcaacgagtgtcaatcgaacttctggggcaatccgaatgtggagtgttatccgtgtgaa
tgtgacgtgatcggttccgccagccagcaatgcgacagggagactggagtatgcgtctgc
cataaaggtatcggtggagagaagtgcgatcaatgtgaccgcggctaccatggagaggct
ccgcagtgcagcccttgcggcgaatgtttcgacaattgggacctaatattggatggtctc
aaaaacaagacaaacgcggtcattcaggaggcctcgaggatacagaaggtcggcacgacc
ggtgtttacagccaagaattcgacgatatggaggagtccctaaatgaagtacaggattta
atcagcaacactaccattcggagccaagacctagacacgttggataacttggccgaggag
ttggcgaagaatatctccatatcgaccaaacaattggaagaagtaaacaatcacttggag
aatcttagtcaacgagttaatcttggtgacgtcgcactgaagagattaaggaataggact
aacattctacatgacgccgccgccgatttgcgggagaatgccactaggttacaggaagag
aatgttttaggtgctctcaacgtaactcagcagatggcagagcaatctagacaagctgag
aaaatggcaaatgattctacgaatgttctgggcgacgcagaacgattccgcaagcatact
gaaaacctcttggcgaagaatcgcgcatccgtggacgatgctcaagaaaggaataaagaa
tcattgacgaagttgaatgagaaactaaagacgttccgtatggcgatacctgaactaaat
ctacgcatgtgtggtgacaatgtaacggagtgtagtagcgtctgcggcggtgcgggctgt
ggtacctgtggaggattatcttgtgacgttggcgcggtcagcaaggccaatcaagctcta
gacgttgccaaacagcaaactgccaagatcaagagtcataaggatgatgccgaacaacta
ttacgtaatatgagtcaaatcaaacaagatgcaacagcggcaagatcgaacgctcaagac
gccttcaacatcgcatgggaggcacagagcttctttgagaagctcgccaaggacatggca
aacatgatcaagcaaatgttaagtactcaggatgaggaccaacctacgccagctatggta
agagctcttgcgtacgcaatacttgcgaggaatatccagctggagccgaatcaaatcgaa
cagttggccgatcgcatcgaggatatggtgggttctctcactgactccgaaaagattctc
gccgataccaaggacgatttacagttggcgcatgacctcgaggaacgcgccaaccaaatt
aaattaacagccatcgagaaacaagtcttggcaaataaaatgattttgctgttgaatgac
gcacaaaaagcgcaacatctggcgcaagaggcgatcgataaggcggaagctgacgtgtcc
aaatcgcagaaagatctcgcggatattgccgatgtgacaaaggccgctcagatccaagct
aacagcaccacacaaacggtagaagcactagatacccgtttgaagcagcttcaaacgcaa
tctgcaaaaaacagtttcatcctgacggagatcggtacggaggcaaagaaagtcgccgat
gaagcacaggcaatcgatggcaagacgaaaaaactgtcggaggaatacaagagggcggat
gagtcactgaatcagcgagtcaataagaccaagggcgatattctgcgagcgaagagactc
ttaacgcgcgcttccgaactaacagcagacacgtcgaccaagtccaaggatctggacggc
atggagagtgtttataaggaaaatgaacgattgctgaaggaactgatgagcgacatagac
gggctgatgacggagatggaaagaaacatggcggagatcgagaagaagtcgcagttgtac
agacagtgttcagcttaa
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