Cyphomyrmex costatus: 108773895
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Entry
108773895 CDS
T11118
Name
(RefSeq) rho guanine nucleotide exchange factor 11 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccoa04131
]
108773895
Membrane trafficking [BR:
ccoa04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108773895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH_16
RGS-like
PDZ
C1_1
PDZ_6
PDZ_2
RGS
DUF7809
PH_13
PH
Pept_S41_N_bact
C1_2
PDZ_Tricorn
MAP3K_TRAF_bd
Motif
Other DBs
NCBI-GeneID:
108773895
NCBI-ProteinID:
XP_018395358
LinkDB
All DBs
Position
Unknown
AA seq
1700 aa
AA seq
DB search
MNGTAALRRSVGAGAGAISGGAIEPAPIATLVVYKDDAGFGMKVSGDNPVYVQSVKEGGA
AARAGLHAGDKIIKVNGVNVMQSTHTDVVQLIKSSTQVVLTVQQKPVTSSGVAAAVATAT
TATTTSGLQVGVVAATNQQPQRPVSLSAAGNMSPSQPVTSLHRASTAPAGSAPCNTRITG
PQPVDLEKKRQLETQRVHTFQLMLEKEQSYVDKLRSELAKTSTGSSSTHITAVQAELAGA
ERRVRTLQEQLAAISTTNEQLCSLVTNTSCSSGYCPLSSSSSGADVPPPLPSRKSLSMQS
LSPPPLPPRPPSIIQNTVQPERHLLIHLTPSTVNQGISNSFSQDANLNTSNALSKHQRTK
SSPEQLGITAISPSEASKRLIASESMNDLLPPRHVKHNDIDINELPRITPPGTPPPPYPA
PVLGQDIFSSTLNDVLPTDTIPGLPTFQQPIMSMEEDDVSDQEIGQVEDHGPFQSLSRLW
GHHAHLAVFINYVLSNSDPSSLLFYLVTDLYKEGNAKEMKKWAYEIHSSFLVPGAPLRLH
NVDENVANEIDDVLLKESDKEEILRKIFWKARTRAKEELNEQLTHFQQKRTAGLATIFGP
TDISLDESISDKARETKIIETYLLPKMEPYLEDIEKEHVDLRLFTTAAGLATILIKIFQL
RPVWVDRVPTFVAKDKSNIKARLLVGKSRKMTIRGHHFVAHQYFTITYCNHCQLIIGGIG
PQGYLCNDCSLNVHRQCVRVVEENCPGPLMRKERANDRISKLMERIRPERKPLSSHHHSQ
NYIPHLDKIKKSEEDSGVLTDGENGEHRIGSLAGNTRNNCDRMRISSLGGINDHTENLDN
PSSREDISEMVQQNISSKPKTSNINRSESYKERIHHKRQLREKRKTSDPNLSKTKVGSSD
CEPSGIFPVNSAGSSSNSSLSTRSLDSPSTSLEQVHPTSSVANASTSWDSDIDVEADPPD
WSQAVSEDVLAQLSNSEKKRQDVINELFHTERSHVRALKVLSRVFHKPLLESQVLPSDQI
QLLFPNLAEMLKIHSQFNQAMKRKKKENPCVSDVGELLLEMFDGEAGERFENAASIYCAK
QQVALDALRDRRRKDSKLNVFLNEVEANPLCRRLQLKDHILTGMLRLTKYPLLFENLAKY
TPDNNEKEKAAILRSLDRSKEILSRVNQAVKEAEDHQRLTEIQRTIDRSAFDKFDHPTVQ
EFKNLDITKRKLIYEGPLQWRRTEPNRSMPNRSVPKPVDLHVVLLDDTIFFLHRQDDKYL
LKFINTTNQAGNSVLSPIVKLSTVLVRHNAAEKDSLYLVNTSENGAQMYNLVAPSSAERK
LWCKHISEAVEAYKARDRQGRRSTPSATLAEEPTHSMEDASSSGVEADGITVEKDQLQDR
ELRDLGQNTAGMQEHDEEMPETTTVTGTPTTEYTQQRIQSTESPTTGMTESLRMVTCTQL
SLIDPLEVHVEAPPVHVAEPILTPIECLRRKDEIIKEALREKQLLMAEILNIPKEDFEHV
ADIASEPSIVEKEPAELILAAITQTDQLMGMLNSSLNISETETVFASCGSSTLSFSGCEA
TGCPPLRSHSHPQQSVMGMMQPICYYLTSQLSQLSQLLEIVKEREEEREKLRKELRRSRE
RIHALDIEMQRREFSEIVTTTTHTQTMLDDLVPQDNSSNDFTHHDQEFIDAHGETTTTDC
GYVEDLELKAETEVIGDSVG
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaacagcagcgctacgacgcagcgtcggggctggtgcaggcgccatcagtggt
ggagccattgaaccagcacccatcgccactctggttgtatacaaggacgatgctgggttt
ggaatgaaagtttccggcgacaatccagtctacgttcagtctgtaaaagaaggcggtgcg
gcagcaagagctggtcttcatgcgggcgataaaataatcaaggtgaatggagtcaatgtg
atgcaatctacacatactgatgtagttcagcttataaaatcatcgacgcaagttgtactg
acagtgcagcagaaaccagtaacgtcaagtggcgtcgcagcagcggtagcgacagcaact
acagcaacaacaacctccggtttacaggttggggtagttgctgctacaaatcaacagcct
caacgtccagttagtttgtcagcggccggaaatatgtcaccttcgcaaccggtgacttct
cttcacagagcatccactgcaccagcgggcagtgctccgtgtaatactcgaattacgggt
cctcaaccagttgatcttgagaagaaacggcagttggaaacacagagagttcacacattc
caacttatgttggaaaaagaacaaagttacgtagataaattacgaagcgagttggcaaaa
actagcactggcagtagcagcactcatatcacggctgtacaggcagaactggcgggtgct
gagagaagagtacgcactttgcaggaacaacttgcagcgattagtacgacaaatgaacag
ctttgctcattggtaacaaatacctcgtgttcctcgggttattgtccactctcaagcagt
agcagtggcgcagacgtgccacctccattgccgtcgcgcaaatccttatccatgcaaagt
ctctctccgccacctttgcctcctagacctccatctatcatacaaaacacagtccaaccg
gagcgacatctgctgattcacttaacgccttcaaccgtcaatcagggaatttctaactct
ttttctcaagatgccaatttgaacacttcaaacgcgctcagtaaacatcagcgaactaag
tccagtccggaacaattgggaataacagcaatatctccatcagaagctagtaaacgttta
attgcttctgaatcaatgaatgatttattacctccaagacatgtcaagcataatgatatt
gatatcaacgaattaccacgtattacaccaccaggaacaccaccgccaccatatcctgcc
cctgttttaggacaagacattttctcatccacgttaaatgatgtacttccaactgatact
attcctggactgccaacgttccaacagccaattatgtcaatggaagaagatgatgttagc
gatcaagaaattggtcaagtagaagatcatggaccattccaatctttatccagactgtgg
ggacatcatgcacaccttgctgtatttattaattatgtattatctaatagtgatccttct
agtttgttattttatttagtaacggatttatataaagaaggaaatgccaaagagatgaaa
aaatgggcatatgaaattcattctagttttctagtacctggtgcgccattacgtctacat
aatgtagatgagaatgttgcgaatgaaattgatgatgtccttttgaaagaatctgataaa
gaagaaattctcagaaagatattttggaaagcacgtactagagcgaaggaagaattgaac
gaacagttaacgcattttcaacagaagagaactgcgggattggccacaatttttggtcca
accgatatttcacttgatgagagcatatctgataaagcgcgtgaaactaaaattattgaa
acatatcttttgccgaaaatggaaccttatttggaagacatagaaaaagaacatgtggat
ttacggctctttacgactgcagctggtctagccacgatattgataaagatttttcaatta
cgaccagtatgggtcgatcgagtacctacctttgttgcaaaagataaatccaatatcaaa
gcgcggcttcttgttggaaaatcgcgtaagatgacaatcagaggacatcattttgtagcg
catcagtattttacaataacttactgcaatcattgtcaacttattatcggcggtattggc
cctcaaggatatttatgtaatgattgttctctcaatgtacatcgacaatgcgttcgtgtg
gtagaagaaaactgtcctggtcccttaatgcgaaaagaaagagccaatgataggatcagt
aaattaatggaacgtattcgaccggagaggaaacctctatcatctcatcatcattctcag
aattatataccccatctcgataaaataaaaaaaagtgaagaagattccggtgtactaacg
gatggagaaaatggtgaacatcgcatcggcagtttggccggaaacactcgtaacaactgc
gacagaatgcgaatttccagtttaggaggaatcaacgatcatactgagaatttagacaat
ccttcatcacgagaagatatttccgaaatggtccagcaaaatatttccagtaagccaaag
acgtcaaacatcaacaggtctgaaagttacaaggagcggatacatcataagcggcagttg
agagaaaaaaggaagaccagtgatccgaatctgtccaaaacaaaggttggttccagtgat
tgcgaaccttctggtatatttcccgtgaactcggccggcagttcatcgaatagcagcctc
tcgacaaggagtctggatagtcctagtaccagtttggaacaggtacatccaacctcatca
gtggcaaacgcgtcaacttcgtgggacagtgatatcgatgttgaagctgatccgccggat
tggagtcaagctgtcagcgaagatgttctcgctcagctcagcaactccgagaaaaaaaga
caagatgttattaacgagctatttcacaccgagcgctctcatgttcgcgcgttaaaagtt
ctttcacgcgtcttccacaaacctttattggaatctcaagtgctaccatcagatcagatt
cagctgcttttccctaatctggctgaaatgttgaagatacattcacaatttaatcaagcg
atgaagcgaaagaaaaaggaaaatccatgcgtgagtgacgtaggcgaacttctattagag
atgtttgacggtgaagctggtgagagatttgaaaatgctgcatcaatttattgtgctaaa
cagcaagttgccttagacgctttgcgcgatcgtcgacgtaaggattctaagttaaacgtt
ttcttaaacgaagtggaagcaaatccattatgccgccggcttcagttgaaagatcacata
ctaactggcatgctgcgactcacaaagtacccgttgctctttgaaaatctcgctaagtac
acgccagacaataatgaaaaagagaaagcagccatattgcgtagcctcgatcgtagtaaa
gagattttaagtcgggtgaatcaggctgtgaaggaggccgaagaccaccaacgacttaca
gagatccaacgaacaatcgatcgatcagcttttgataaatttgatcatccgactgtgcaa
gagttcaagaaccttgatattacaaaacgcaagttgatctatgaagggccgctgcagtgg
cgacgtactgagccgaatcgatcgatgccaaatcgttcggtgccgaaaccagtcgatctg
catgtagtgctgctcgatgatacgatcttttttttgcatcggcaagacgataaatatctg
cttaaatttatcaatacgactaaccaggcgggcaattccgtgctgagtccgattgtgaag
ttatccactgtactagtgcgtcacaatgccgctgagaaagattccctctatcttgtcaat
acttcggaaaatggtgcgcagatgtataatctagtggcaccgtcctcggcagaacgaaaa
ctttggtgcaaacacatctccgaagctgtggaggcttataaagcgcgcgaccgacaaggc
aggagatcaacgccgtccgctacactggcggaggagccaacacactcgatggaagacgca
tcatcttctggagtagaagcggatggtataactgttgaaaaagatcagctgcaagatcga
gaattaagggatcttggacaaaatactgctggcatgcaagagcatgatgaggaaatgccg
gaaactaccactgttacgggaactcctacaactgaatatacacaacagcggatacaatcg
accgagtcgccaacaacaggtatgactgaatctctacgaatggtcacgtgcactcaacta
tcattaatagatccattggaagttcatgtggaagcaccaccagtacacgttgcagaacca
attcttacgccaatagaatgtctgaggcgtaaggatgaaataattaaagaagctctgcgc
gaaaaacaattattaatggcagaaatattgaatatccctaaagaagattttgaacatgtg
gcagatatagcgtctgaaccatccattgtggaaaaagagcctgctgaattgatacttgct
gctattactcaaactgatcagctgatgggaatgctgaattcttcattaaatataagtgag
acggaaacagtatttgcgtcatgtggatcatcgacgttatcattttctggatgtgaagct
actggttgtcctccgctacgaagtcattcacatcctcaacaatcagtcatgggaatgatg
cagccgatttgttattatctaacatctcaactctcacaactgtcgcaactcctggagatt
gtgaaagagagagaagaagagcgagagaaactgcggaaagaattgcgtagaagcagggaa
cgcatacatgctcttgatattgagatgcaacgacgtgaattttcggaaatagtaaccaca
acaactcatacacaaacgatgcttgatgatcttgtgcctcaggacaatagcagcaatgac
ttcactcatcatgatcaggaatttattgatgcgcacggagaaacaactactacagattgc
ggatatgtggaagaccttgagcttaaagctgaaactgaagtgataggcgacagcgttggt
tga
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integrated database retrieval system
